Coregonus clupeaformis (lake whitefish): 121567651
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Entry
121567651 CDS
T08357
Name
(RefSeq) structural maintenance of chromosomes protein 4-like isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121567651
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
121567651
Condensin II
121567651
BRITE hierarchy
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GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
HIP1_clath_bdg
APG6_N
HMMR_N
COG6_N
Laminin_II
Motif
Other DBs
NCBI-GeneID:
121567651
NCBI-ProteinID:
XP_041733773
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Position
6:28612055..28633617
Genome browser
AA seq
1295 aa
AA seq
DB search
MPAKTSKSSTASKPRGKGSQPRDDSEDELDVPPKEANSNGQEAPPTNAPVPGEGAEAVDN
RSLEEILGSIPPPPPPAMTNEPGAPRLMITHIVNQNFKSYAGEEILGPFHKRFSCIIGPN
GSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHSSDQHKDVQSCTVEVHFQKIIDKEGDDY
EVIPNSKFYVSRTASKDNSSSYHINGKKATFKDVGTLLRSHGIDLDHNRFLILQGEVEQI
AMMKPKGQTEHDEGMLEYLEDIIGSCRLKQPIHTLSRRVELLNEQRGEKLNRVKMVEKEK
TALEGEKNTAVEFLTLENDIFKQKSQLCQYYVHDLQKRVANKEEEKQRIQDDTKELTEKN
NNIAEEMEKNNQELKNVEKKQGKLTKYIEGQKEKFTQLDLQDVEVREKLKHTKSKIKKLQ
KQLEKDKEKLEEVRNVPASSEKTISEASACREELEKQKGKEEEKLKEVMESLKEETSGLQ
QEKETKEKELMELSKAVNETRSRQDVAQSELDIYLSRHNTALTQLNTAKQSLQTASDTLR
DRRAAIKDLQVKIPQCEQELKKDEVELEQLLQADGQARELVRDMRQKVEEAKSSLSSNRS
RGKVLDALMQQKRSGKIPGILGRLGDLGAIDEKYDIAISSSCGSLDNILVDSIDTAQKCV
NFLKAQNIGVATFIGLDKMKVWENKMGPISTPENIPRLFDMVRVQDESMKPAFYFALRDT
LVAKDLEQATRLAFQKDKRWRVVTMQGQIIEMAGTMTGGGGRAMRGRMGSSIGTEVTQQE
LDRMESKLNEKVVQLQGCQERKLQLEEKVQRLRQQLRDMKNTLEKYTNSMQSLAEQEAHL
KPQIKELEANVLAAAPDKNKQKQLEKSLKDFQKDFEAASNKAGKVEAEVKRLHTLIVDIN
SHKLKAQQDKLDKVNKELDDCSSAITKAQVAIKTAGRNLKKCEEGVSRLEGELEENEKSL
EELTDHLKRLEEEAGEIMKACQEAEAALPEVQEQHQGVVREIKALQEQEHALQEESLSVR
LRVEQIDTSITEHTNKIKHWQREASKLSLHAIDGKPVEALPVLTPADLAAIKGPDITTNQ
ISLLEARCAQMKPNLGAIAEYKKKEELYLKRVAELDEITTERDNFKRGCEDLRKQRLNEF
MAGFNIITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGE
KTLSSLALVFALHHFKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRNNM
FEIADRLIGIYKTHNTTKSVGINPKTIVFKEPISA
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgccagccaaaacgtcgaaaagttcaactgcttccaagccaagagggaaagggtcgcag
cctcgggatgactccgaagacgagttggacgtaccccctaaagaagcgaactccaatggc
caagaggcaccgccgacaaatgctccggttcccggggagggtgccgaggctgttgataat
cgaagtttggaggagattcttggtagcatccctccacccccgcccccagcaatgaccaat
gaaccaggcgctcctcgcttgatgattacacatatagttaatcagaacttcaaatcctat
gctggcgaggagattctgggccctttccataagcgcttttcctgtatcattggtccaaat
ggcagtgggaagtccaacgtgatagattcaatgctctttgtgttcggctatagggctcaa
aaaatcagatccaaaaaactctctgtgctgattcacagctctgaccagcacaaggatgtg
cagagctgcactgtggaagtgcattttcagaaaattattgacaaggaaggagatgactac
gaagtcatccccaacagcaagttctatgtttccagaactgccagcaaagacaattcctca
tcctaccacatcaatggcaagaaggccacttttaaagatgtgggaactctgctgcgtagc
catggcattgacctggaccacaacagatttctgattttacagggtgaggtggagcagata
gccatgatgaagcccaaggggcagacggagcatgatgagggcatgctggaatacctggag
gacatcattggctcctgccgcctgaagcagcccatccacaccctgagccgacgtgtcgag
ctcctcaacgagcagaggggagagaagctaaacagggtcaaaatggtggagaaggagaag
actgctctggagggagagaagaacacagccgtggagttcctcactttggagaatgatatt
ttcaaacaaaagagccagctctgccagtactatgtccatgacctccagaagagagtggca
aacaaagaggaggagaagcagaggatccaagacgacaccaaggagctcacagagaaaaac
aacaacatcgctgaagagatggagaagaacaaccaagagctgaaaaacgtggagaagaaa
caaggcaagctgaccaagtacattgagggccagaaggagaagtttacccagctggacctg
caggatgtggaggtcagagagaaactgaagcacacgaagagtaagatcaagaaactgcag
aagcaactggagaaggataaggagaagctggaggaggtgcgtaacgtgccggccagcagt
gagaagaccatctctgaggcgtccgcttgcagggaggagttggagaaacagaaggggaag
gaggaggagaaactgaaggaagtgatggagagtctgaaggaggagaccagcggtctgcag
caggagaaggagactaaggagaaggagctgatggagctgagtaaggctgtgaacgagacc
cgctcccgtcaggacgtggcccagtctgagctggacatctacctgagtcgacacaacacc
gctctgacccagctgaacacggccaagcagtccctgcagaccgcctccgacacactgcga
gaccgccgcgccgccatcaaagacctgcaggtcaaaataccccagtgtgaacaggagctc
aagaaggatgaggtggagctggagcagctgctgcaagcagacggtcaggccagggagctg
gtgagggacatgaggcagaaggtggaggaggccaagagctccctgtcctctaaccgcagc
cgggggaaggtgctggacgccctcatgcagcagaagaggagcggcaagatccccggcatc
ctgggacgactaggtgaccttggggccatcgatgagaagtatgacattgccatctcgtcc
agctgtggctctctggacaacatcctggttgacagcatcgacacggcccagaaatgtgtc
aacttcctcaaggcccagaatatcggagtggccacctttattggcctggacaagatgaag
gtgtgggagaataagatggggcccatctccaccccagagaacattccccgtctgtttgac
atggtgcgggttcaggacgagagtatgaaaccagccttctactttgccctgcgggacacc
ctggtggccaaggacctggagcaggcaacacgcctcgccttccagaaggacaagcgctgg
agggtggtcaccatgcagggacagatcatagagatggctggcaccatgactggaggtgga
gggagagcgatgcggggcaggatgggctcctccattggcactgaggtcacccagcaggag
ctggaccgtatggagagcaagctgaatgagaaggtggtgcagctgcagggctgccaggag
aggaagctgcagctggaggagaaagtccagagactccgacagcagctcagagacatgaag
aacaccctggagaaatacaccaacagcatgcagagcttggcagagcaggaggctcacctg
aagcctcaaattaaagagctggaggccaatgtcctggctgctgctcctgacaagaacaaa
cagaaacagttggagaagagcctgaaggacttccagaaagactttgaggcagcctccaat
aaggcagggaaggtggaggctgaggtgaagaggctccacaccctcatcgtggatatcaat
agccataagctgaaggcccagcaggacaaactggacaaagtcaacaaggagctggacgac
tgctcctcagccatcaccaaggctcaggtggccatcaagaccgcagggcgtaacctgaag
aagtgtgaagagggtgtgagtcgcctggagggagagctggaggagaatgagaagagtctg
gaagagctgacggatcatctgaagaggctggaggaggaggctggggagatcatgaaggcc
tgccaggaggctgaggcagcactgccagaggtgcaggagcagcaccagggggtggtgagg
gagatcaaggccctacaggagcaggaacacgctctgcaggaggagtccctcagcgtccgc
ctccgggtggagcagatagacacctccatcaccgaacacaccaacaagatcaaacactgg
cagcgagaggcctctaagctctcccttcacgccattgatggcaaaccagtggaagcgctg
cccgtgctgacccctgctgacctggcggccatcaaggggcctgacatcaccaccaaccag
atctccctgctggaggcccgctgtgcccagatgaagcccaacctgggagccatcgcagag
tacaagaagaaggaggaactgtacctgaagcgtgtagctgagctggatgagatcaccaca
gagagagacaacttcaagcgcggctgtgaggacctgcgcaagcagaggctcaatgagttc
atggctggcttcaacatcatcaccaacaagctaaaggagaactaccagatgctgacacta
gggggtgatgctgagctggagctagtcgacagcctggaccccttctctgagggcatcatg
ttcagtgtgcgtccccctaagaagagctggaagaagatcttcaacctgtctggaggagag
aagaccctgagctctctggccctggtgtttgctctgcaccacttcaagcccacgcccctc
tacttcatggatgagattgatgcagccctggacttcaagaatgtctccatcgtggcctgt
tacatttatgagcaaactaagaacgctcagttcatcatcatctccctgaggaataacatg
tttgagatcgctgaccgtctaatcggcatctacaaaacccacaacaccaccaagagcgtg
ggaatcaaccctaaaaccattgtcttcaaagagccaatctcagcttag
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