Entry |
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Name |
(RefSeq) inner ear-specific collagen-like
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KO |
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Organism |
cclu Coregonus clupeaformis (lake whitefish)
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Brite |
KEGG Orthology (KO) [BR:cclu00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:cclu04990]
121567656
Domain-containing proteins not elsewhere classified [BR:cclu04990]
C1q domain-containing proteins
Adiponectin / short collagen group proteins
121567656
|
SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
6:28732237..28735416
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AA seq |
485 aa
MLPYHLALLAVMSLTVTSVSTKTTQRPKYQYTKKPMPYREQPQITMQPLTTIIPKTLKSV
EKSDLMDPYPLATTETTPYPSDAYQDYYTESTGPPGVGHDNYTLDYNECYFNFCECCPPE
RGPRGPKGDRGLPGSPGEEGERGPRGFPGLAGSNGTTGPKGDRGVKGDQGYRGMAGTPGI
PGKPGERGGFGFKGEKGDSGPPGVKGDRGEQGESQNGAKGERGEPGMEGPTGPPGLAGAQ
DLKGDKGDKGECGTFGERGLKGDRGDPGPPGIQGQVGLPGVDGMQGSPGVAGNQGAPGPP
GAQGEPGVIGLPGPQGGRGMFGPKGDRGPPGMRGDRGPRGIRGAKGNGVIQKRSAFSVGL
SPSKSFPPSGFPVRFDKVFYNGENHFNASSNSFTCAHGGVYVFSYHITVRNKPLRAALVV
NGVRKVRTRDSLYGQDIDQASSLVLLQLSAGDQVWLETLRDWNGVYASSEDDSTFSGFLL
YADKP |
NT seq |
1458 nt +upstreamnt +downstreamnt
atgctcccctatcacttggccctcttggcagtgatgtcactcacagtgaccagtgtatcg
acgaagaccactcaacggccaaagtaccaatacaccaagaagcccatgccttaccgcgaa
cagccccagattaccatgcagcccctaaccaccatcatccctaagacactgaaatcagtg
gagaaatcagatctcatggacccctaccccctggctaccacagagaccacaccctacccc
agtgatgcctaccaggactactatactgaaagcacagggccccctggtgttgggcatgat
aattacaccctggattataacgagtgctacttcaatttttgtgagtgctgtccaccagag
aggggccctcgagggccaaaaggggacagaggactaccaggttcacctggagaagagggg
gagcgaggacccagaggctttcctggactggctggttcaaatggaactacagggccaaaa
ggagacagaggagttaaaggtgaccaaggataccgtggaatggcaggaactccgggtatc
ccagggaagccaggagagagaggtggatttggcttcaaaggtgaaaaaggtgacagcggg
ccccctggggtcaaaggtgaccggggggagcagggtgaaagccaaaatggggctaagggt
gagagaggggaacctggaatggaaggcccaacaggacccccagggctggctggggcacaa
gacctgaagggggacaagggggacaaaggggagtgtgggacatttggggaaagaggactg
aagggcgatagaggggaccctgggcctccaggtattcagggacaggtgggccttcctggg
gtagatggcatgcagggctcccctggtgtggcgggcaaccagggggctccaggacctcca
ggggctcaaggtgagccaggggtgatagggctgcctggtccccagggagggagggggatg
tttgggccaaagggtgacagaggcccccccgggatgagaggggacaggggccctcggggg
atcagaggggcgaagggtaacggggtgattcagaaacgctcagctttcagtgtgggcctc
tcccccagcaagtccttccctccatcgggcttcccagtccgcttcgacaaggtcttctac
aacggagagaaccacttcaacgcctcctccaacagcttcacctgtgcccacgggggggtc
tacgtgttctcctaccacatcactgtgcggaacaagcccctgcgcgccgccctggtagtc
aacggggtgaggaaggtgcggacgcgggactcactgtacggccaggacatcgaccaggca
tccagcctggtgctgctgcagctgtcggcgggggaccaggtatggctagagacactgagg
gactggaatggagtctacgccagcagtgaggatgacagcaccttctctggcttcctgctc
tacgctgacaagccctga |