KEGG   Coregonus clupeaformis (lake whitefish): 121567656
Entry
121567656         CDS       T08357                                 
Name
(RefSeq) inner ear-specific collagen-like
  KO
K24214  otolin-1
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:cclu04990]
    121567656
Domain-containing proteins not elsewhere classified [BR:cclu04990]
 C1q domain-containing proteins
  Adiponectin / short collagen group proteins
   121567656
SSDB
Motif
Pfam: Collagen C1q BclA_C
Other DBs
NCBI-GeneID: 121567656
NCBI-ProteinID: XP_041733780
LinkDB
Position
6:28732237..28735416
AA seq 485 aa
MLPYHLALLAVMSLTVTSVSTKTTQRPKYQYTKKPMPYREQPQITMQPLTTIIPKTLKSV
EKSDLMDPYPLATTETTPYPSDAYQDYYTESTGPPGVGHDNYTLDYNECYFNFCECCPPE
RGPRGPKGDRGLPGSPGEEGERGPRGFPGLAGSNGTTGPKGDRGVKGDQGYRGMAGTPGI
PGKPGERGGFGFKGEKGDSGPPGVKGDRGEQGESQNGAKGERGEPGMEGPTGPPGLAGAQ
DLKGDKGDKGECGTFGERGLKGDRGDPGPPGIQGQVGLPGVDGMQGSPGVAGNQGAPGPP
GAQGEPGVIGLPGPQGGRGMFGPKGDRGPPGMRGDRGPRGIRGAKGNGVIQKRSAFSVGL
SPSKSFPPSGFPVRFDKVFYNGENHFNASSNSFTCAHGGVYVFSYHITVRNKPLRAALVV
NGVRKVRTRDSLYGQDIDQASSLVLLQLSAGDQVWLETLRDWNGVYASSEDDSTFSGFLL
YADKP
NT seq 1458 nt   +upstreamnt  +downstreamnt
atgctcccctatcacttggccctcttggcagtgatgtcactcacagtgaccagtgtatcg
acgaagaccactcaacggccaaagtaccaatacaccaagaagcccatgccttaccgcgaa
cagccccagattaccatgcagcccctaaccaccatcatccctaagacactgaaatcagtg
gagaaatcagatctcatggacccctaccccctggctaccacagagaccacaccctacccc
agtgatgcctaccaggactactatactgaaagcacagggccccctggtgttgggcatgat
aattacaccctggattataacgagtgctacttcaatttttgtgagtgctgtccaccagag
aggggccctcgagggccaaaaggggacagaggactaccaggttcacctggagaagagggg
gagcgaggacccagaggctttcctggactggctggttcaaatggaactacagggccaaaa
ggagacagaggagttaaaggtgaccaaggataccgtggaatggcaggaactccgggtatc
ccagggaagccaggagagagaggtggatttggcttcaaaggtgaaaaaggtgacagcggg
ccccctggggtcaaaggtgaccggggggagcagggtgaaagccaaaatggggctaagggt
gagagaggggaacctggaatggaaggcccaacaggacccccagggctggctggggcacaa
gacctgaagggggacaagggggacaaaggggagtgtgggacatttggggaaagaggactg
aagggcgatagaggggaccctgggcctccaggtattcagggacaggtgggccttcctggg
gtagatggcatgcagggctcccctggtgtggcgggcaaccagggggctccaggacctcca
ggggctcaaggtgagccaggggtgatagggctgcctggtccccagggagggagggggatg
tttgggccaaagggtgacagaggcccccccgggatgagaggggacaggggccctcggggg
atcagaggggcgaagggtaacggggtgattcagaaacgctcagctttcagtgtgggcctc
tcccccagcaagtccttccctccatcgggcttcccagtccgcttcgacaaggtcttctac
aacggagagaaccacttcaacgcctcctccaacagcttcacctgtgcccacgggggggtc
tacgtgttctcctaccacatcactgtgcggaacaagcccctgcgcgccgccctggtagtc
aacggggtgaggaaggtgcggacgcgggactcactgtacggccaggacatcgaccaggca
tccagcctggtgctgctgcagctgtcggcgggggaccaggtatggctagagacactgagg
gactggaatggagtctacgccagcagtgaggatgacagcaccttctctggcttcctgctc
tacgctgacaagccctga

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