Coregonus clupeaformis (lake whitefish): 121567703
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Entry
121567703 CDS
T08357
Name
(RefSeq) paired box protein Pax-3-like isoform X1
KO
K09381
paired box protein 3/7
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121567703
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
121567703
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAX
Pax7
Homeodomain
HTH_23
HTH_32
Homeobox_KN
SEEK1
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
121567703
NCBI-ProteinID:
XP_041733862
LinkDB
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Position
6:complement(20013800..20046328)
Genome browser
AA seq
498 aa
AA seq
DB search
MTALAGAIPRMMRPMLAQNYPHSGFPLEVSTPLGQGRMNQLGGVFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQGTTPDVEKRIEE
YKRDNPGMFSWEIRDKLLMDGICDRNTVPSVSSISRIMRSKFGGKGDDDDDEDEIEKKEL
EEHERRAKHSIEGILGDRSSHSDEGSDVESEPDLPLKRKQRRSRTTFTAEQLDELERAFE
RTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGASQLMAFNHLIPGGFPPSAM
SSLSPYQLSDSPYPPTSISQAVSEQASTLHRPQPLPPSSGHHQSSGGGGQDGGSAYCLAS
GRHGFSGYSDSFVTSGGPPNPMNPAIGNGLSSQVMGLLNPGGVPHQPQSDYALSPLTGGL
EPPGGMGASCSQRLEHIKGLEGLSSVPNIPSLPSLPNSQSYCQSSYSAPAYSVDPVASYQ
YGQYHGQSALHYLRPEIT
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgttggctggggcaataccaaggatgatgcgccccatgctggctcagaactac
ccccacagtggcttcccattggaagtctctactccgttaggccaaggcagaatgaaccag
ctcgggggagttttcataaatggcagacctttgcccaaccatatccgtcataagatcgtc
gaaatggcccaccatggaatcaggccgtgcgtaatctcccgtcagctccgcgtctctcac
ggttgcgtttccaaaatcctctgccggtaccaggagaccggctccatccgacccggggcc
atcgggggaagcaaacccaagcaggggacgacgcctgatgttgagaagagaatagaggag
tacaagcgggacaacccgggtatgtttagctgggagattcgggataaattactgatggat
gggatatgtgaccggaacaccgttccatcagtgagctctatcagtcgcatcatgaggagt
aaattcggagggaagggagatgacgatgatgatgaagatgaaatcgagaaaaaggaatta
gaagaacacgaacggcgggccaaacacagcatcgagggcatcttaggagaccgatcgagc
cactcagatgaggggtcagacgtggagtcggaaccagacctgcctctgaagaggaagcag
cgccgcagtagaaccaccttcacggccgaacagctggatgagctggagagagccttcgaa
cgaacacactaccctgacatctacaccagggaagagctggctcagagggccaaacttaca
gaggccagagtacaggtgtggttcagtaacagaagagcccggtggaggaagcaggctgga
gctagtcagctcatggccttcaatcacctgatccctggggggttcccgccctctgctatg
tccagtctctcaccttatcagctgtctgacagcccgtatccgcctacatccatatcacaa
gcggtgtcggagcaggccagcacgctgcaccggccccagcccctgcccccgtcctcaggc
caccaccagagctcaggagggggaggacaggatggggggtctgcctactgcctggcctct
ggacgccacggcttctcaggctactccgacagctttgtcacgtcaggaggccctcccaac
cccatgaaccctgccatcggcaacggcctctcttcccaggtgatgggtctgttgaaccca
ggcggggtgccccaccagccccagagtgactacgccctctcccccctgacaggaggcctg
gagccccccgggggcatgggggccagctgctcccagcgtctggagcacatcaagggtctg
gagggcctgtccagtgtccccaacatccccagtctcccctcgctgcccaactcccagtcc
tactgccagtcctcctacagcgctcctgcctacagcgtggaccccgtggcctcctaccag
tatgggcagtaccacggacaaagtgcccttcattatctgagacctgagatcacctga
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