Coregonus clupeaformis (lake whitefish): 121567712
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Entry
121567712 CDS
T08357
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 3
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00061
Fatty acid biosynthesis
cclu00071
Fatty acid degradation
cclu01100
Metabolic pathways
cclu01212
Fatty acid metabolism
cclu03320
PPAR signaling pathway
cclu04146
Peroxisome
cclu04216
Ferroptosis
cclu04920
Adipocytokine signaling pathway
Module
cclu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
121567712
00071 Fatty acid degradation
121567712
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121567712
09143 Cell growth and death
04216 Ferroptosis
121567712
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
121567712
03320 PPAR signaling pathway
121567712
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cclu01004
]
121567712
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121567712
Enzymes [BR:
cclu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
121567712
Lipid biosynthesis proteins [BR:
cclu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
121567712
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of breast milk
121567712
Exosomal proteins of breast cancer cells
121567712
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
121567712
NCBI-ProteinID:
XP_041733875
LinkDB
All DBs
Position
6:20126754..20176664
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AA seq
717 aa
AA seq
DB search
MKLKEDLNPVLLLLFQVTVWLYSILAFLPSYLFSSVSESDAGLGSEQERAQRLKAQSVTG
RPAGPYRAMSTTKRLVSSLHPGVDTLDKVFEDASRRFPDRDCLGTREVVMEEDERQSNGK
VFKKVILGQYRWLSYAETHSAAARFGSGLAVLGQRAHNNIAIFCETRAEWVIAAQACFMQ
NFPLVTLYSTLGGPAITHGLNETEVSHIITSRELLETRLKFILLEVPRLQHIIVVDDTPT
KWPGYPRGISVHNMATVQELGTKPENVSRGCKQPMPSDIAVIMYTSGSTGVPKGVMISHS
NIIAGITGMAERIPNLGENDTYIGYLPLAHVLELSAELVCVAHGCRIGYSSPQTLADQST
KIKTGSKGDTSVLQPTLMAAVPEIMDRIYKNVMTKVEEMSSAQRTLFTLAYNYKLEQLSK
GRSTPLCDNLVFKKVRSLLGGKTRVLLSGGAPLSAATQRFMNVCFCCPVGQGYGLTETCG
AGTISEMWDYSTGRVGGPLICSEIKLKDWVEGGYHSTDTPTPRGEILIGGPNVTMGYYKN
EAKNQDFFVDDNGQRWFCTGDIGEVHPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAMLKN
CPLIDNICAYANSDEMYVIGFVVPNQKHLLSLAEQYRIRGSWEELCNNAAMEEVVLQVIT
EAALSAQLERFEIPRKIRLSPDPWTPETGLVTEAFKLKRQQLKSKYQDDIERMYGGK
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaaagaggatctgaacccggtgctgctgctgctcttccaggtgacggtgtgg
ctgtactctatcctagccttcctcccctcttacctcttcagctctgtgtcagaatcagac
gcaggcctcggctcagaacaggagagggctcagagactcaaggcccagtctgtgacgggt
cgccccgcggggccctacagggccatgagcaccaccaagaggctggtgtcgtccctgcac
cccggggtagacacactggataaggtgtttgaggacgcatccagaaggttccctgacaga
gactgcctgggcaccagagaggtggtcatggaggaggacgagagacagagcaacggaaag
gtcttcaagaaggtgatcttggggcagtaccgctggctgtcctatgctgagacccacagt
gcagcagcccgctttggcagtggtctggcagtgcttggccagagggcccacaacaatatt
gccatcttctgtgagaccagggccgagtgggtcatagctgcacaggcctgcttcatgcaa
aacttccccttggtcactctgtactctaccctggggggtccggccatcactcacggtctg
aacgagacagaggtcagtcacatcatcaccagcagagagctactggagaccagactcaaa
ttcatcctgttggaggtgcccaggctgcagcacatcatcgtggtggatgacacgcccacc
aagtggcccggttacccacgaggcatcagtgtccacaacatggccactgttcaggagctg
gggaccaagcctgagaatgtgtctcgtgggtgtaaacagcccatgccctctgacatcgct
gtcatcatgtacaccagcggctccactggcgtacccaagggcgtcatgatctcccatagc
aacatcatcgctggcatcactggcatggcagaaaggatacccaacctgggtgagaatgac
acctacatcgggtacctccccctggcccatgtgttggagctgagtgcagagctggtgtgt
gtggctcacggctgcaggatcggatactcctccccccagacactagcggaccagtcgaca
aagataaaaacaggcagtaaaggagacaccagtgttctgcaacctactcttatggcagct
gtgccggagataatggatcgtatctataagaatgtgatgaccaaggtggaggagatgagc
agtgctcagaggactctgttcactctggcctacaactacaagctggagcagctctccaaa
ggacgcagcacgccactgtgtgacaacctggtctttaagaaggtgcggtccctactgggg
gggaagaccagggtgctgctgtcgggcggggcgcccctctctgccgccacccagcgcttc
atgaacgtgtgcttctgttgccccgtgggccagggctacggcctcaccgagacctgtgga
gctggaaccatcagcgagatgtgggactacagtacagggcgagttggtggaccgctcatt
tgttctgaaatcaagctcaaggattgggtggagggtggctaccacagcacagacacgccc
accccacgaggcgagatcctgattggcgggcccaacgttaccatgggttactacaagaat
gaggccaagaaccaggacttctttgtggatgacaatggccagcgctggttctgtactgga
gacataggagaagtccatcctgatggatgcctcaagatcattgatcgtaagaaggacctg
gttaagctccaggctggagagtatgtgtctctggggaaggtggaggccatgctgaagaac
tgcccccttatagacaacatctgtgcctacgccaacagcgatgagatgtacgtgattggc
tttgtggtgcccaatcagaagcatctgctttcgctagcggagcagtatcgtatccggggc
tcatgggaggagctgtgtaacaacgctgccatggaggaggtggtcctgcaggtcatcacc
gaggccgccctatcagcccagctggagcggtttgagatcccccgtaagatccgtctgagc
cctgacccctggacccccgagacgggcctggtgaccgaagccttcaagctcaaacgccag
cagctgaagagcaagtaccaggacgacatcgagagaatgtacggtgggaagtag
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