Coregonus clupeaformis (lake whitefish): 121567720
Help
Entry
121567720 CDS
T08357
Name
(RefSeq) chordin-like
KO
K04657
chordin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121567720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHRD
VWC
Amnionless
DUF3040
Motif
Other DBs
NCBI-GeneID:
121567720
NCBI-ProteinID:
XP_041733884
LinkDB
All DBs
Position
6:complement(20655956..20678430)
Genome browser
AA seq
947 aa
AA seq
DB search
MQTRRSLSSLLCVMSCAWLHSGLASRLKSPVLPIHSEREPLPSKGMSGCSFGGRFYSLED
TWHPDLGEPFGVMHCVQCYCETQRGRKGKVLGKVSCKNVKQDCPEPSCGDPVLLPGQCCK
TCPKGEVDRKQAEAVFDGFEYFQEKEKEDDLHKSYNDRSYLSSEDISPGESRTDFVAVLT
GVTDSWLPSSSGVARARFSLTRTSLTFSITYQRIGRPSRVVFLDSDGNTAFEYKTPKGYS
NMICGVWKNLPQSHVQQLQAEQLRVTMTTATGRQEQIEGKIIKHRALFAETFSSTLTSEE
EHSGMGGVAMLTLSDTENNLHFILILQGLIQHRQRDSPLVPIRVRLQYRQHVLREIHANV
TAYDPDFAEVLTDLNSRELFWLSRGQLVIAVETEGQDPRHISGFITGRKSCDTIQSVMSS
GDALTAGKTGGVGSAFFNLHDNGTLDYQVQIAGLSSEVVGLTIELKPRRRSKRSVLYDLT
PEFDRPSGRAVGSWSRLEARHIHMLLQNELFINVATAHSQEGELRGQIRALLYSGLEAPR
HEIPVPLAGQFVAPPVLTSAGGHAWVSVDERCHLHYEIVVAGLSKADDLTVNAHLHGLAE
IGELDESSTNHKRLLTGFYGSQAQGVLKDISVELLRHLDRGTAFIQVSTKVNTRGEIRGR
VHVPNNCEFGTRGEVEMAEFDDLFVRDPEELKKDPHTCFFESQHHAHGSLWTPNYNNCFT
CSCQKRTVICDPVICPVLNCSRTIQPEDKCCPVCLERKDPKDMTAPERLDEHPEGCYFEG
DQKMHAPGSTWHPFVPPFGYIKCALCTCKGATGEVHCEKVTCPALTCSRPVRRSPSDCCK
ECPEEDKPPLEHADMMQADGTRHCKFGKNFYQNSDNWHPRVPLMGEMKCITCWCDHGVTK
CQRKQCPVLTCGNITRREGMCCPECQDSKEEEEELMKVPEKKNSWRH
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgcagactcgccgctcgctgagttccttattgtgcgtgatgagctgcgcgtggctgcac
tctggactggcctcacggctaaagtctcccgttctgcccatccattcggagagggagcct
ttaccatccaagggcatgtcaggatgttcatttggaggaagattctattcgctggaggac
acttggcaccctgacctcggtgagccgtttggggtcatgcactgtgtccaatgttactgc
gagacacaaaggggtcgtaagggtaaggtgttggggaaggtgagctgtaagaacgtcaag
caggactgtcctgagcctagctgtggtgacccagtgctgctacctggacaatgctgcaag
acctgccccaaaggcgaggtggacaggaagcaggcggaggcggtgtttgatggctttgag
tacttccaggagaaggagaaagaggatgatctgcacaagtcctacaatgaccgctcatac
ctcagctctgaggacatttcccccggggagagccgcactgactttgtagcagtgttgacg
ggagtgacagactcctggttacccagctccagtggtgtggcccgggcacgcttctctctc
actagaaccagcctgaccttctccatcacctaccagaggatcgggcgaccaagcagggtt
gtcttccttgattcagatggaaacactgcgtttgagtacaagacccctaagggatactca
aacatgatctgcggggtgtggaaaaatcttccccaatcccacgtgcaacagctacaggca
gaacaacttcgggttactatgacaacagccaccggtagacaggagcagatcgaaggaaag
atcatcaaacacagagcactcttcgcagagacgttcagctccactctgacctcagaagag
gagcattctgggatgggaggcgtcgccatgttgactctgagtgacacagagaacaacctt
cacttcatcctcatactgcagggactgatacaacacagacagagagactcccccctggtg
cccatccgggtacgactgcagtaccgccaacatgtcctgagagagatccatgccaacgtc
accgcctatgacccagactttgctgaggtgctgacagacctgaacagtcgggagctcttc
tggttgtcaagaggccagctggtgatcgctgtggaaaccgagggccaggacccccgacac
atctccggcttcatcaccggcaggaagtcttgtgacaccatccagagtgtcatgtccagt
ggtgatgcattgacagcagggaagacaggcggcgtgggatcagcattctttaatctccat
gataacggcaccctggactaccaggtccagatagcggggttatccagtgaggtggtgggt
ttgaccatcgagctaaagcctcggcggcgcagtaagcgatccgtgctgtacgacctaact
ccagagttcgacaggcccagcgggcgggcggtgggaagctggagtcgtctagaggcacgt
cacatccacatgctgctgcagaacgaactgttcatcaacgtggctaccgcacacagccag
gagggggagctacgcggacagatcagagccctgctctacagcggcctggaggcacccaga
cacgagatccctgtccctctggcaggccagtttgtggcccctccagtcctgaccagtgct
gggggccatgcctgggtgtctgtggacgagcgctgtcacctccattatgagattgtggtg
gcaggcctcagcaaagctgatgatctcacagtcaacgcccacctccacggattggccgaa
atcggagagctggacgagagcagcaccaatcacaagagacttctgacagggttctacggt
tctcaggcccagggtgtgttgaaggacatcagtgtagagttgttgcgtcacctggacaga
gggacagccttcatccaggtcagcaccaaggtcaacaccagaggagagatacgtggacgg
gtccatgtgcctaataactgtgagtttgggacaaggggtgaggtggagatggcggagttt
gatgacctgtttgtgcgtgaccctgaggaactaaagaaagacccccacacctgtttcttc
gagagtcaacaccacgcccacggctccctctggacccccaactacaacaactgtttcacc
tgcagctgtcagaagcgcacagtgatctgtgacccggtcatctgtccagttctcaactgc
tctcgcaccatccagcctgaggacaagtgctgccccgtatgtctcgagaggaaagacccc
aaggacatgacagctccagagaggctagacgagcatccagaaggttgttactttgagggg
gaccagaagatgcatgctcctgggtctacctggcatccattcgtccctccgtttggctac
attaagtgtgccctctgcacctgcaagggggcgacaggcgaggtgcactgtgagaaggtg
acgtgtccagccctgacctgcagtcgtccggtacgccgcagcccctcagactgctgtaag
gagtgtccggaggaagacaaaccccctttggagcacgctgacatgatgcaggcagacggg
acgcgtcactgcaagtttgggaagaacttctaccagaacagtgacaactggcacccccgt
gtgcccctgatgggagagatgaagtgcatcacctgctggtgtgaccatggtgtgactaag
tgtcagaggaagcagtgtccagtcctgacctgtggtaacatcacccgccgggagggcatg
tgctgtcctgagtgccaagattccaaagaggaagaggaggagctgatgaaagttccggaa
aagaagaacagctggagacactga
DBGET
integrated database retrieval system
