KEGG   Coregonus clupeaformis (lake whitefish): 121567786
Entry
121567786         CDS       T08357                                 
Name
(RefSeq) roundabout homolog 1-like
  KO
K06753  roundabout, axon guidance receptor 1
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cclu04515]
    121567786
Cell adhesion molecules [BR:cclu04515]
 Immunoglobulin superfamily
  ROBO family
   121567786
SSDB
Motif
Pfam: I-set Ig_3 ig Ig_2 V-set fn3 C2-set_2 Ig_5 Ig_DSCAM-DSCAML_C Ig_C17orf99 Pur_ac_phosph_N BiPBP_C fn3_2 VID27_N
Other DBs
NCBI-GeneID: 121567786
NCBI-ProteinID: XP_041733998
LinkDB
Position
6:complement(16342138..16755285)
AA seq 900 aa
MRVTWSGATPFVIVALLRLVQSQLLEGSLVPDTGAATQDGASEGATPAPTSEHEDDNSLG
YTGSRLRQEDSPPRIVEHPSDLIVSKGEPATLNCKAEGRPSPTVEWYKDGERVETDRDNP
RSQRMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAVSHNASLEVALLRDDFRQN
PADVMVAAGEPAVLECMPPRGHPEPSISWKKDGANIDDRDERITIRGGKLMITNARKSDA
GKYVCVGTNMVGERESEIAELTVLERPSFVKRPGSQVVLVDQSVEFRCEARGDPVPTVRW
RKEDGDLPKGRYEIREDHTLKIRRLTSADVGSYTCVAENMVGKAEASATLTVHVVSVPPV
FVVRPRNQVVAVGRTVTFQCEATGNPQPAIFWQREGSQNLLFSYQPPQPSSRVSVSQTGD
LTITDAERSDMGYYSCQALNIAGSVITKALLEVTDVVSDRPPPVVRQGPTNQTVSVDGTV
VLSCLATGNPTPTILWRKDGVLVSTHDSRVKQLDTGALQIRYAKLGDTGMYTCIASTPSG
EASWKAYLEVQEFGVPVQPARPTDPNLIPSAPSKPEVTDVTRTSVTLSWKPNVTGATPTS
YIIEAFSHASGSSWQTLAEHVKTESYVLKGLKASAVYLFLVRAANAYGLSDPSPITDTVK
TQDIPPTSQGVDHRQIQRELGEVVIHLHNPTILSSSSVRVQWTVEQQSQYIQGYKVMYRA
SPEGQQRSDWAVFEVRTPGEDSTVVPQLRKGVTYEFKVRPFFNEFQGTDSEVKIAKTLEE
APSAAPRGVTITESGDNGTAIVVSWQPPPEEEQNGLVQEYKIWCLGNESRYHINRTVDGS
TFSLLIPSLAPGIRYSVEVAASTGAGPGVKSDVTFFQIDSSGLYDGGCGGLREHSVPADQ
NT seq 2703 nt   +upstreamnt  +downstreamnt
atgcgtgtcacatggtcaggtgccacgcccttcgtcattgttgccctgctcaggcttgtc
caatcacagctgctggagggatctctggttccagacacaggcgctgccactcaggatggg
gccagtgaaggggccacgccggcccccacctcagaacacgaggatgacaactccctgggc
tacacaggatctcgtctgcgccaggaggactccccaccccggatcgtggagcacccctct
gacctgatcgtgtccaagggggagccggccaccctcaactgcaaggcggaggggaggccc
agccccacggtggagtggtacaaggacggggagcgggtggaaacggaccgggacaaccct
cgatctcaacgcatgctgctgcccagcggctccctcttcttcctacgtattgtccacgga
cgacgctccaaaccggatgagggctcctacgtttgcgtcgcccgcaactacctgggagaa
gccgtcagccacaacgcctcgctggaagtagcattactacgcgatgacttcagacagaac
cctgccgatgtgatggtggcagcgggcgagcctgcagtcctagagtgtatgccccctcgc
gggcatcctgaacctagcatatcctggaagaaggacggtgccaacatcgatgacagagat
gaacgaatcactatccggggaggaaagctgatgataaccaatgccagaaaaagcgacgct
gggaagtatgtgtgtgtcgggaccaacatggtgggagagagggagagcgagatcgctgag
ctcactgtgctcgagcgacccagctttgtgaagcgtcccggcagccaggtggtgctggtg
gaccagagtgtggagttcaggtgtgaggcccggggtgacccagttcccaccgtccgctgg
aggaaagaggacggagacctgcccaagggaagatatgagatccgagaggaccacaccctg
aagatccgtcgtctgacctctgcagacgtgggttcttacacctgcgtggcagagaacatg
gtgggcaaggcggaggcatcagccaccctcaccgtccacgtcgtgtctgtgccccctgtg
tttgtggtgcggcccaggaaccaggtggtggcggtggggaggactgtcaccttccagtgt
gaggccacaggaaacccccaacctgctatcttctggcagagagagggcagccagaacctg
ctcttctcctaccagcccccccagccgtctagccgcgtctccgtctcccagacgggggac
ctgactatcacagatgcagagcgctcagacatgggctactacagctgccaggccctcaac
atcgctggctctgtcatcaccaaggccctgctggaggtcactgacgttgtgtcggatcgc
ccacctccagttgtccgccagggtccgaccaatcagacagtgtctgtggacgggacggtg
gtcctgagttgcctagcaacgggcaaccccacccccaccatcctgtggaggaaggacgga
gtgttggtgtccactcacgactctcgggtcaaacagctggacacgggcgcactgcagatc
cgctacgccaagctgggtgacacaggcatgtacacatgcatcgcctccactcccagtggc
gaggcctcgtggaaggcctacctggaggttcaagagtttggtgttccagtgcagccggcc
agacccactgaccccaacctgatccccagcgccccctccaaacctgaggtcactgacgtc
actcgcacctctgtcaccctgtcctggaagcccaacgtcacaggagccacacccacctcc
tacatcatagaggccttcagtcatgcgtcaggcagcagctggcagaccctggcagaacat
gtgaagactgagtcgtatgtgttgaagggcctgaaggccagtgctgtctacctgttcctg
gtccgagctgctaatgcctacggcctgagtgaccccagccccataactgacaccgtcaaa
acacaagatatcccccccaccagtcagggagtggaccaccgtcagatccagagggagtta
ggagaggtggtcatccaccttcacaaccccaccatcctctcctcctcctccgtcagagtg
cagtggacggtggagcagcagtctcagtacatccagggttataaggtgatgtacagggcc
tctccagaggggcagcagaggagtgactgggctgtgtttgaggtgagaaccccaggggag
gacagcactgtggtgccccagctcaggaaaggagtcacctacgagttcaaagttcgcccc
ttcttcaacgagttccagggaacagacagtgaggtcaagatagccaagactctggaggaa
gctcccagtgcagcccctcgtggggttaccatcacagagagtggggacaatgggaccgcc
atcgtggtctcttggcaaccgcctccagaggaggagcagaacgggttagtccaggagtac
aagatctggtgtttgggtaatgagagcaggtaccatatcaaccgtacggtggacggctct
accttctccttgctgatccccagcctggctccagggatccgttacagtgtggaggtcgca
gccagcactggggcaggcccaggggtcaagtctgatgtcaccttcttccagatagactca
tcggggctgtatgacggagggtgtggtggactcagagaacactctgtcccagcagatcag
tga

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