Coregonus clupeaformis (lake whitefish): 121567824
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Entry
121567824 CDS
T08357
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121567824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121567824
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121567824
Endosome - Golgi transport
Arf GTPase associated proteins
121567824
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121567824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH
RhoGAP
ArfGap
RA
PH_11
PH_6
PH_8
PH_13
PH_9
Motif
Other DBs
NCBI-GeneID:
121567824
NCBI-ProteinID:
XP_041734071
LinkDB
All DBs
Position
6:complement(32042231..32102613)
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AA seq
1237 aa
AA seq
DB search
MRRVPQPPPEIRSDSGDSSDDYQEPDQVYPKPQRVNMADRDVFLPVPGSGKGRYSSLCSD
DELLDDDNEPISIRNSSWQDYGLSTLQESVYLPVTGRVLAPPPRDGPSPEPCPVLKMGWL
DKNPPQGSLYYQRRWVKLDVDYLRYFDNDKEVYSKRIIPTAAITGVTNVGEQKFEVVTTN
RTFLFRAESDSERNEWVSVLQNFTKGRQEGSREITASVPPSLLTPGSPLTPEQQGYLELR
GLRSKLYTVVSGDKVFLYKNVEDYRLGIGITSIDMNVGNVKDTDRRSFDLTTPYRIFSFL
ADSEQHKEQWVEAMRDAIGEALSNSEVANQIWAEPSNGCCADCGAAKPEWAAINLCVVVC
KRCAGEHRGLGPSISKVRSLKMDRKVWTEELIQVFLLLGNERLNGFWAANVPPSEALSPT
SCSEDRRLFISSKYRQGKYRKYHPLYGNQRELNNALCINVQCSDVLETLCLVFCGADVNC
STGQADCPSPLSLAHAHNQKLQAEFLSHNLNTELPRSEVAGLMEPQHYSPQHSVTHNGFL
FKTASMARPITERKAKEEFSRRWCTLNDGNFSYYESDKTSTPNGVLKSTEIVCLAVNTPE
RHGYDHTFELYSDSERLYLFGTDDPVSHKEWVKSITKTFILPNAEGLLRLGFDRIGRLRY
KDGLNLQSPRVGWFALVGSSLHAYLEDSVEEEEIHLRKLQELSIQQENEVLVLVERGRTL
YIEGERKLDFQGWCVSIQRAAGSAGDSLSQQQLTETDIPVIVDRCIDYITQCGLTSEGIY
RKSGVNSRVAALCEAFRRDARSVRLKEGEHQVDDVSNTLKRFFRESGEGLFPIQAASAWL
STPVVPDESMKISQYQLLLSRLPRVNKATLRALVNHLYCVQRFAELNQMNLHNLAIVFGP
TLFQTDGKDYTAGRVVEELIEHYTDIFEVDEQQLKRQLDEITAIIKVREKLNLNSSVPAS
GSAGDFICTVYLEEKKETAEQHVKIPGSMTAAELTCEILDRRKIQVREKDYWSCWEVSQK
EETERPLHHLERVLPILHSLGTDSHLLVKKHLAMEAILVYLASKVDVSKHGMVKFREERS
ILGLGLNTGSFHDRYFILSTVSLRMYKEVRSNRPEREWQVKNLRIYLGIKKKLRPPTCWG
LTVIYESEKQEKPERQQWYLCCDTQTEMREWFSTFLTIQYDGNVWPADAVQTRVTRVLPV
DTRHGNVALIPLRGSENEMRNSVAAFNTDPLGLFRDV
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgagaagagtcccccagccaccgcctgaaatcaggtcagattctggtgacagttcagat
gactatcaggaaccagaccaagtctaccccaagccccagcgtgtgaacatggcagacagg
gatgtgttcctgccagtgccggggtcggggaaggggcggtacagctctctctgcagtgac
gatgaactattggacgatgacaacgagccaatcagcatccgaaatagctcgtggcaggac
tatggtctgagtacgctccaggagagtgtctacctgccggtcacaggcagggtcctagcc
ccgccccctagagatggcccctccccagaaccctgccctgttctaaagatgggctggctg
gataagaacccaccccaggggtccctgtactatcagaggagatgggtgaagctggatgtt
gactacctgagatactttgacaacgacaaggaagtgtactctaagaggatcataccaaca
gctgccattacgggagtgaccaacgtgggggagcagaagtttgaggtggtcacaaccaac
cggacctttctcttcagagccgagagcgactctgagaggaatgagtgggtgtcagttctg
cagaacttcactaaggggcgccaggagggcagcagggagattactgcatcggtcccaccc
tccttactgacccctggttcacccctgacccctgaacagcagggctacctggagctgagg
ggcctgcgctccaaactctacacggtcgtctccggagacaaggtcttcctctacaagaac
gtggaggactaccgccttggcattggcatcacgtctattgacatgaacgtaggaaacgtg
aaagacactgaccgccgcagctttgatctgaccacaccctaccgcatcttcagttttcta
gcggattcggaacaacataaggagcagtgggtagaagcgatgcgtgacgcgattggagag
gctctgtccaatagcgaggtggctaatcaaatctgggcggagcctagcaacggttgctgt
gccgactgtggcgccgccaaacctgagtgggctgccatcaacctgtgtgtggtggtctgc
aaacgctgtgcaggagagcaccggggtctgggtcccagcatctctaaggtacgcagtctg
aagatggacaggaaggtgtggacagaggagcttatacaggtgttccttttgctaggtaat
gagcgtctgaatgggttctgggcggcgaacgtccctcccagcgaagcgctgagtccgacc
agctgcagcgaagaccgccgactattcatcagctccaaatacagacagggcaaataccgc
aaataccaccccctctacggcaaccagagagagctcaacaacgccctgtgtataaacgtg
cagtgcagtgatgtcctggagacgttgtgtctggtcttctgtggagctgatgtgaactgt
tctacagggcaggctgactgtccctctcccctctccctggcacacgcacacaaccagaaa
ctacaggccgagttcctctcacacaacctcaacacagagctgccacggtcggaggtggct
gggcttatggagcctcaacactattcaccacagcactccgtcactcacaatggcttcctt
ttcaagaccgcctccatggcccggcctatcacggagcgcaaggccaaggaggagttcagt
cgtcgctggtgcacgttgaatgatgggaactttagttactacgagagtgacaagacctct
acacccaacggagtcctgaagtctacagagatagtctgtctggctgtcaacacaccagag
agacacggctatgaccatacgtttgagctgtactcagactctgagcgtctctatctgttt
ggcactgatgacccagtcagccacaaggagtgggttaaatccatcaccaagacatttatt
ctgcccaatgcagagggcctgttgaggctgggttttgataggattggccggctgcggtat
aaagacgggctgaatctacagagccctcgggttggctggttcgctctggtcggctcctcc
ctccatgcctacctagaggacagtgtggaagaggaggagatacacctacgcaaactacag
gagctctcgatccagcaggagaatgaggtgctggttctggtggagagaggcaggactctg
tacatcgagggggagaggaagcttgacttccagggttggtgtgtgtccatccagagagca
gcaggcagtgcaggagactcgcttagtcagcagcaactaactgagactgacatccctgtt
atagtggaccgctgcattgactacatcacacagtgcggtctgacgtctgagggtatctac
cgtaagagcggtgtgaacagtcgcgtggcggcactgtgcgaggcgtttcggcgtgatgct
cgtagcgtgcgtctgaaggagggggagcaccaggtggacgacgtgtctaacacactgaaa
cgcttcttcagagagtctggagagggactgttccccatacaggccgctagcgcatggctc
agtacacctgtggtccctgatgagagcatgaagatttctcagtaccagctgctgctgagc
cgcctgcccagagtcaacaaggccacgctacgagccctggtcaaccacctctactgtgtg
cagcggtttgcagagctgaaccagatgaatctccataacctggcgatagtgtttggcccc
acactgttccagaccgacgggaaagactacacagccggccgcgtcgtagaggaactcata
gagcactacacagatatctttgaggtggatgaacagcagctgaaaaggcagctagatgag
atcacggccatcattaaagtccgagagaagttgaacctcaactccagcgtccctgcgtcg
gggtcagcaggtgacttcatctgtacagtgtacctggaggagaagaaggagacagcagag
cagcatgtcaagatccctggttctatgacggctgcagagctgacctgtgagattctggac
cggcggaagatccaggtccgagagaaagactactggagctgctgggaggtcagccagaag
gaggagactgagcgtccgttacatcatctcgagcgtgtgttacccatcctgcactctctg
ggtaccgactcccacctgctggtcaaaaaacacctcgccatggaggccatactcgtctac
ctggccagtaaagtggatgtgtccaagcacgggatggtgaagttccgggaggagaggagc
attctgggattgggactgaataccggcagtttccacgaccgctacttcatcctcagcact
gtctccctcaggatgtataaggaagttcggagtaatcgtccagagagggaatggcaggtg
aagaatctgaggatctatctaggcatcaagaagaaactacgaccacccacctgttggggt
ctgactgtgatctatgaaagtgaaaaacaggagaagccagagaggcagcaatggtatctg
tgttgtgacactcagacagagatgagggagtggttctctacgtttctcactatccagtat
gacggtaacgtgtggccagcggatgcagtacaaacacgtgtgacccgtgtgttgccggtg
gatacgcgtcatggtaacgtggcgttgattccgttgcgtggcagtgagaatgagatgcgg
aacagcgttgcagctttcaacactgacccgcttggcctctttagagatgtctga
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