Coregonus clupeaformis (lake whitefish): 121567862
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Entry
121567862 CDS
T08357
Symbol
top2a
Name
(RefSeq) DNA topoisomerase 2-alpha
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cclu03032
]
121567862 (top2a)
03036 Chromosome and associated proteins [BR:
cclu03036
]
121567862 (top2a)
Enzymes [BR:
cclu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
121567862 (top2a)
DNA replication proteins [BR:
cclu03032
]
Eukaryotic type
DNA Topoisomerases
121567862 (top2a)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
121567862 (top2a)
Centrosome formation proteins
Centriole proteins
121567862 (top2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
HATPase_c
Toprim
Motif
Other DBs
NCBI-GeneID:
121567862
NCBI-ProteinID:
XP_041734147
LinkDB
All DBs
Position
1:36580499..36606154
Genome browser
AA seq
1569 aa
AA seq
DB search
MAEPLKSLFENKAVEKTKKNPNRLSVERIYQKKTQLEHILLRPDTYIGSVEPVTQQLWVF
DEDVGMNCRDVTFVPGLYKIFDEILVNAADNKQRDKTMSCIKINIDAENNSISVWNNGKG
IPVVEHKVEKVYVPALIFGQLLTSSNYDDDQKKVTGGRNGYGAKLCNIFSNTFTVETACK
ESKKTFKQTWYDNMGRAGEHKIRSFEGDEFTCITFQPDLAKFKMQTLDKDTVAIMTRRAY
DIAGATKGVRVFLNGKRLPVTSFRNYVDLYLKDKLDELGSPLTVVHEVVNERWEVCLTMS
EKGFQQVSFVNSIATTKGGRHADYVADQVTSKLIEVVKKKNKAGVVVKPFQVKNHMWIFV
NCLIENPTFDSQTKENMTLQQKSFGSTCPLSDKFIKQANSCGIVESIMNWVKFKAQTQLN
KKCSAVKHTKIKGVPKLDDANDAGGKNSSGCTLILTEGDSAKTLAVSGLGVVGRDHYGVF
PLRGKMLNVREASHKQIMENAEINNIIKILGLQYKKNYSDPESLKSLRYGKLMIMTDQDL
DGSHIKGLLINFIHHNWPSLLRHNFLEEFITPIIKATNKKQELPFYSIPEFNEWKEMQPN
IKSWKIKYYKGLGTSTSKEAKEYFSDMHRHRIPFKYAGPADDEAITLAFSKKKIEERKEW
LTSFMVNRRQRREHNLPEEYLYGQATKSLSYNDFVNKELVMFSNSDNERSLPCLVDGLKP
GQRKVLFCCFKRNDKREVKVAQLAGSVAEMSAYHHGEVSLMMTIIGLAQNFVGSNNLNLL
QPQGQFGTRLHGGKDSASPRYIFTMLSPLARLLFPQVDDNLLKYNYDDNQRVEPEWYIPI
IPTVLVNGADGIGTGWASRLPNFDVREIVNNLHRMLNGEEPLPMLPNYKGFKGTIEQLMT
NQYMNSGEVAIIDSTTIEISELPVKTWTQAYKENVLEAMLNGTEKVPALITDYKEYHTDT
TVRFVVKMTEERLREAEAAGLHKVFKLQQSLTCNSMVLFDHVGSLKKYELVQDVLKDFFE
LRMKYYVLRKDWLAGMLGAESAKLTNQARFILEKIQGTLVIENKPKKQLILMLTEMGYDS
DPVKAWKEAQEKDKTVEETGDDDDEEKEEDTTGPDYNYLLNMPMWYLTKEKKEELCKQRD
AKLTELNTLKQKSPADLWKEDLAAFTEELERVEEKDRENATMPAVKGKAGKGKVVKVKQE
TMPTPQGRRVIPRITSTMKAEASRKAVVKKGKKGEEVVMKMEFEDGGENGEAAAEEMGLA
ARLTKKPKAPAKDKVSKALGKQTTLSFKPMAAKKAKRNPWSDASGSDSEMEILLEVDPVV
PKEKPERKAKAAVKYSMSSSEDEFDCGMSAPKAAAAISDDDDGFVPEPSAAVDSEADSPP
PKAPEPTKKVVKSKSATVKEAKSKSSSQSDGDDATASKPPAKPKAAAKKPAAAKKPAAPK
KKAAAPLDATQPSIMEALSKPKPTSKTAAMKIPSFDSSGSEGPSNAPAPSKAAPAKRKAL
DSDDSDRSSEDLMSRIKGKKTSIANKKTKVWDDESFQMSDEEAVAPRSKPVRAKKPIAYN
FDSDSEEDF
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccattgaagagcttgtttgagaacaaggcggtagagaagaccaagaagaac
cctaaccgcctgtcagtggaaaggatataccagaaaaagactcagctggagcacattctg
ctgcgtccagacacctacatcggctctgtggagcctgtcacacagcaattgtgggtgttt
gatgaggatgttggaatgaactgtcgagatgtgacctttgtaccaggtctctacaagatc
tttgacgagatccttgtgaatgccgccgataacaagcaaagagataaaaccatgtcctgc
atcaaaataaacattgacgctgagaacaactccatcagtgtgtggaacaatgggaagggc
atccctgtggtggagcacaaggtggagaaggtctatgtgccagctctcatcttcggacag
ctcctcacctccagtaactatgatgacgaccagaagaaggtcaccggtggacgcaacgga
tatggtgccaagctttgcaacattttcagcaacacgtttactgtggagactgcctgcaag
gagtccaagaagaccttcaagcagacgtggtatgacaacatggggcgggctggggaacac
aagatcaggtcgtttgaaggcgatgagttcacgtgcatcaccttccagccggacctggcc
aagttcaagatgcagaccctggacaaggacacggtggctatcatgacccgacgggcttac
gacatcgccggtgccaccaagggggtccgcgtgttcctcaacggcaagaggctacctgtg
acgagtttccgtaactacgtggacctgtacctgaaggacaagttggatgagctgggctca
cccctcacagtggtccacgaggtggtgaacgagcgctgggaggtgtgcctcacaatgagc
gagaagggcttccagcaagtcagcttcgtcaacagcatcgccaccaccaagggtggaaga
catgctgactatgtggcagaccaggtgacatccaagctcattgaagtggtcaagaagaag
aacaaggctggagtggtcgtcaagcctttccaggtgaagaaccacatgtggatttttgtc
aactgcctgattgagaaccctaccttcgactcccagaccaaggagaacatgaccctgcag
cagaagagcttcggttccacctgccccctcagtgacaagtttatcaaacaggccaactcc
tgtgggatagtggagagcatcatgaactgggtgaagttcaaggcccagacgcagctcaac
aagaagtgctctgccgtcaagcacaccaagatcaagggcgtgcccaagctggacgacgcc
aacgacgcaggtggtaagaactccagcggctgcactctaatcctgacggagggtgactcg
gccaaaacgctggccgtgtctggtctgggcgtggttggcagagaccactacggggtcttt
cctctcaggggaaaaatgctcaacgtgcgggaggcctcgcacaagcagatcatggagaat
gctgagatcaacaacatcatcaagatcctggggctgcagtacaagaagaactacagcgac
ccagaatccctcaagtccctgcgctatggcaaactcatgatcatgaccgatcaggacctg
gatggctcccacatcaaggggttgctcatcaacttcatccaccacaactggccctcgctg
ctgcgccacaacttcctggaggagttcatcacccccatcatcaaggccactaacaagaag
caggagctacccttttacagcatcccagagttcaatgagtggaaggagatgcagcccaac
atcaaatcttggaaaataaaatactacaaaggtttgggtaccagcacttcgaaggaagcg
aaggagtacttctctgacatgcacagacatcgcatccccttcaagtacgctggacctgcc
gacgacgaggcaattaccctggcctttagcaagaaaaagattgaggaacgtaaagagtgg
ctgaccagcttcatggtcaacagacgccagcgcagagagcacaacctgcccgaggagtac
ctgtatggtcaagccaccaagtccctgtcctacaacgactttgtcaacaaggagcttgtg
atgttctccaactcagacaacgagaggtccctcccctgcctggtcgatggtctgaagccg
ggccagaggaaggtgctgttctgctgcttcaagaggaatgacaagcgggaggtgaaggtg
gctcagctggctggttccgtggccgagatgtcagcctatcaccatggagaggtctctctc
atgatgaccatcattggcttggcccagaactttgtgggcagcaacaacttgaacctgctg
cagccacagggtcagtttggcacacggctgcacggtggcaaggactctgccagcccccgt
tacatcttcaccatgctcagccccctggctcgtctactcttcccccaggtggacgacaac
ctgctgaagtacaactatgacgacaaccagcgcgtggagcccgagtggtacatccccatc
atccccaccgtgctagtgaacggcgccgacggcatcgggacgggctgggccagccgcctc
cccaacttcgacgtccgcgagatcgtcaataacctccaccgcatgctcaacggggaagag
ccactgcctatgctccccaactacaagggcttcaaaggcacaattgagcagctgatgacc
aaccagtacatgaacagtggagaggtggccatcatcgacagcaccaccatcgagatctct
gagctgcccgtcaagacatggacacaggcctacaaggagaacgttctggaggccatgctg
aacggcacagagaaggtcccggccctcatcaccgactacaaggagtaccacacggacacc
acggtgcgctttgtggtcaagatgaccgaggagaggctgagggaggccgaggcggctggc
ctgcacaaggtcttcaagctgcagcagtccctcacctgcaactccatggtgctgtttgac
catgtgggcagcctaaagaagtatgagttggtgcaggatgtgctgaaggacttctttgag
ttaaggatgaagtactacgttctgagaaaggactggctagccggcatgctgggagccgag
agtgccaagctcaccaaccaggcccgtttcatcttggagaagatccagggaaccctggtc
atcgagaacaagccaaagaaacagctgatcctcatgctgacggaaatgggctacgactct
gaccccgtcaaggcctggaaagaggctcaggagaaggacaagactgtggaggaaacgggg
gatgatgatgatgaggagaaagaggaagacaccactggaccagactacaactacctgcta
aacatgccaatgtggtacctcaccaaggagaagaaagaggagctgtgcaaacagagggat
gccaagttgaccgagctgaacaccctaaaacagaagagcccggctgatctttggaaggag
gacctcgcggccttcactgaggagctggagcgtgtggaggagaaggatcgggagaacgcc
accatgcctgcggtgaagggcaaggctggcaagggcaaggtggtgaaggtgaagcaggag
accatgcccacaccccaggggcgccgcgtcatcccacgcatcaccagcaccatgaaggct
gaggcctccaggaaggccgttgtcaagaaaggcaaaaagggtgaggaagtggtgatgaag
atggagtttgaggatggaggagagaatggagaggctgctgctgaggagatgggcctggca
gcgcgactgaccaagaaacccaaagcaccagccaaggacaaagtatcaaaggcattgggc
aaacagaccaccctgtcgttcaagcccatggcagccaagaaggccaagaggaacccgtgg
tctgacgcatctggctcagacagtgagatggagattctgctggaagttgacccagtggta
cccaaggagaaacctgaacgcaaagccaaagctgctgtgaagtacagcatgtccagcagt
gaggatgagtttgactgtgggatgagcgcccccaaggctgcagcagccattagtgacgat
gacgacggctttgtccccgagcccagcgctgcagtcgatagtgaggcagactctccaccc
cctaaggctcctgagcccacaaagaaagtggtgaaaagcaaatcagcgactgtaaaagaa
gctaaaagcaaatccagctctcagtctgatggcgacgatgcgacggcctctaagcctcca
gccaagcccaaggcagccgccaagaaaccagcagctgccaagaagccagccgcccccaag
aagaaggctgcagcccctctagatgcgacgcagccgtccatcatggaagctctgtccaag
cccaagccaacctccaaaactgctgccatgaagatcccgtcgtttgactccagtggctcg
gagggcccgtccaatgcccctgccccgtctaaggccgcgccggccaagcgcaaggccctg
gacagtgacgactcggacaggagctctgaagacctcatgtcccgcatcaagggcaagaag
acttccatcgccaacaagaaaaccaaagtatgggacgatgagagcttccagatgtcagac
gaggaagctgtagctcccaggagcaaaccagtccgtgccaagaaaccaatcgcttataac
tttgactcagactctgaagaagacttttag
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integrated database retrieval system