Coregonus clupeaformis (lake whitefish): 121567871
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Entry
121567871 CDS
T08357
Name
(RefSeq) stAR-related lipid transfer protein 13-like isoform X1
KO
K20632
deleted in liver cancer protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121567871
Membrane trafficking [BR:
cclu04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121567871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
START
RhoGAP
SAM_2
Tra1_central
Motif
Other DBs
NCBI-GeneID:
121567871
NCBI-ProteinID:
XP_041734154
LinkDB
All DBs
Position
6:complement(36759350..36874424)
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AA seq
1693 aa
AA seq
DB search
MDTALMVTLEERQSLAMSASPGRTFSPQTQPPAQTQIQQQPQPQTQTHQSSSDCVPESSH
DDNSSTERSEDVCLPGPLSLELSKLELDHQDTPQQDREAGSDYKSTGAPGIEGDLAVTTG
GPGGPAGRAESGSDVSPPDPLDPVQIVCPAGLLSEPGSVTSPSPDDANNNGLNLHSTSPG
AAEDPCLASNVLAPRIERNLEVEDSDRPVESGHTLDANLSGQLEDMELGYTSPRQTETDM
ELEQESPRRTETDSQPEDHSEGPVENNHVPVPLVPTENGHIPTLLVQSETEVSQITISVV
QSEAFSSIPSLMVSVDNNMDPFRPPSLPLALSEAPLAGLGLCDQPRIIKHKPSSITFSDY
TCTHSTCHSSTDHSVFINNSSDCRESSSEEDDEGDDDEEGDDDDILPELLQSREFLVSRR
RRSSNRDKVVKKRGSMSPQAEALVSSATNTTASSHRSSSSSSKNQNHSGYEAETESSSTE
ESPLVQPQSPLCESMSQLMRKLDQLNLDIEEALSVSSSPSDTPCTARRQQYGAVSGTALN
QSLNEEDSTLLQRWEPYTGECPRQDQHKTLAPRSSAEGTRARTKKTVICSKMTNAGAELE
AKEACDWLRAAGFPQYAQLFEDSQFPIDISPVKKDHDFLDKDLVEPLCRRLNTLNKCASM
KLDVNLPKKKSEDSDEEDLFAISDRWTFEWTSRRWSRLKGEGQSPREGEGRGLRNTTSSE
SVLTDLSEPEVSSLHSESSGGSGHQAVSTEDSDCSKRNYSDSAAMPEPDSTSLTLSHLPK
HLPYYGSLPAKNSRAGRTRAKDFLCRMETLRSRGTLDRGRSKMLVISAPVLQTEPQALKM
LRCVEITNGDGSGAVEVYTGGPTLGLTPQCPSSSENSHSSGSTISSPSLKERKPHSQRTD
RSDAKRSGMYLEDLAVFSSLQQNSGVAQGKRGVAEHNRHNEFHSYEDLVVHIPKDHKPGT
FPKALSIESLSPTLGASVPWHTGSLNPLEPQSNPNSQPNSNPREFHHCPATQCCPRGSRI
SVYDNVPGSHLYASTGDLLDLEKEDLFPHLDDILQHVNGLQQIVDHWSKNMLPSAGLDGQ
GLQPAGLQSSSQITLDIEGTSVLEGQSTASDGDRDGMSLNETHCTGYRERRDSGVGASLT
RPNRLRWPSFQMSNRLSHAVASLQITNQSAGQLSLLQKFSLLRLTAIMEKYSMSNKHGWT
WSVPKFMKRMKVPDYKDKNVFGVPLIVHVQRSGQPLPLSLQQALRYLRSQCLDQVGLFRK
SGVKSRIQALRQMNEASPDDVSYEDQSAYDIADMVKQFFRDLPEPLLTSKLGETFLHIYQ
YVPKDQRLQAVQAAIMLMSDENREVLQMLLCFLSDVTSSVEENQMTPMNIAVCLAPSLFH
LNILKNDNLSPRAMQRKYATGRPDQKDLNENLAATQGLAHMIIECNRLFEIPHEMVTQSR
KSYVEADLHAPTLKELCRQQEEDDVSYQTETSLSQTHTETRPHNLYQSYIESRLQELLKE
AREKAKCWVSCTSSDNTELYCKKVGDGNPLRRWRVVVEVEAPPSVVLNRVLRDRHLWDVD
LLQWKVAETLDRHTEVFHYVLNRMPPHPSRDFLVLRSWRTDLPKGTCALVCVSVEHEDCP
RVGGVRAVVLESNYLLEPCGSGKSRLTHICRVDLKGRSPEWYNKAFGHLCAAEAARIRNS
FQPISTEGPETKI
NT seq
5082 nt
NT seq
+upstream
nt +downstream
nt
atggacacagctctgatggttactctggaggagcgacagtctctggccatgtcagcatca
cctggcaggaccttctcaccacagacacagccaccggcacagacacagatacagcaacag
ccacaaccacagacacagacacaccagtcctcctcagactgtgttccagagtcttctcat
gatgacaacagctccacagagaggagtgaggatgtctgtctgccaggacctctaagtctg
gagctgtcgaaactggaactagaccaccaggacacaccccagcaggacagggaagctggt
agtgactataaaagtactggagctcctgggatagagggagatctagctgttactactgga
ggtccaggagggccagcagggcgagcagagtctggttctgatgtctcccctcctgaccct
ctagacccagtccagatcgtctgtcccgcaggtctcctcagtgagccaggcagtgtgaca
tcaccatcacctgatgatgccaataacaatggattgaatttacacagcacttctccagga
gcagctgaggacccctgccttgcctccaatgttcttgcgcctaggatagagagaaacctg
gaggttgaggacagtgacagacctgtagaatcaggacataccctggatgctaacctctct
ggtcagctagaggacatggagctggggtatacctcacccaggcagacagagacagacatg
gagctagagcaggagtcacccaggcggacagaaacagacagccagcctgaggaccactca
gaggggcctgtggagaacaaccatgtccccgtccctctagtccccacagaaaatggacat
atccctacccttctggtccaatcagagacagaggtcagccagatcactatctctgtggtc
caatcagaggcttttagctccatcccttctctaatggtcagtgtggacaacaacatggat
cccttccgacctccctccctccccctggccctctctgaggcccccttggcggggctaggc
ctctgcgatcaaccccgcatcatcaaacacaaacctagctccatcaccttctcagactac
acttgtactcattctacctgtcactctagcaccgaccacagcgtcttcatcaacaacagc
tctgactgcagggagtcttcctcagaggaggatgatgaaggtgatgatgatgaagaaggg
gatgatgatgacatattgccagagctgcttcagagcagggagttcctggtcagtaggaga
agaaggagcagcaacagagacaaagtagttaagaagagaggatctatgagtccccaggct
gaggcactagtcagctctgcaaccaacactacagccagctcccaccgctcctcctcctct
tcctccaaaaaccagaaccacagcggctacgaggcagagactgagagcagcagcacagag
gagtctcccctggtccagcctcagtccccattgtgtgagtctatgagccagctgatgagg
aaactggaccagctcaacctggacatagaggaggctctgagtgtatcctcctccccctcg
gacacaccctgcacagcacgcagacaacagtatggagctgtgtctggaacggcattaaac
caatctcttaacgaggaggacagtacactgctgcagcgatgggaaccatacaccggagaa
tgtcccagacaggaccaacacaagaccttggcccctcgtagctcagctgaaggaaccaga
gctaggaccaagaagacagtcatatgcagtaagatgaccaatgcaggagcagaactcgag
gcgaaggaggcgtgtgattggctacgagcggcaggattcccccaatacgctcagctcttt
gaagactctcagttccccattgacatctcgcctgtgaagaaagaccatgactttctggac
aaagacctggtggaacctctctgcagacgactcaacaccttgaacaagtgtgcctctatg
aaactagacgtcaaccttcctaagaaaaagagtgaagactctgatgaggaggacctattt
gccatcagtgacagatggacgtttgagtggacgagccgccgctggtccagactaaagggg
gaggggcagagtcccagagagggggaggggcggggcctgcggaacaccaccagtagcgag
agtgttctaactgacctcagtgaaccagaggtctcatctctccacagtgaaagcagtggg
gggagtggccaccaggccgtgagcacagaggactcggactgttctaaacggaactactcc
gactctgcagccatgcctgaacctgactccacctcccttaccctgtcacatctccctaaa
cacctcccctactatggctcgctgcccgccaaaaacagccgcgccggacggacccgagcc
aaggacttcctgtgccgcatggagacactacgttcccggggtacgctggatagagggcgg
agcaagatgctggtgatcagcgctccggtactgcagacggagccgcaggccctgaagatg
ctgcgctgtgtggagatcaccaatggggatgggtcgggggcggtggaggtatacactggg
ggaccaaccctagggctaaccccccagtgcccctccagcagcgagaacagccactccagc
ggcagcaccatctcctcccccagtctgaaggagaggaagccccactcccagcggacggac
cggtccgacgccaagcgcagtggcatgtatctggaggacttggccgtattttccagcctg
cagcagaacagtggcgtggcccaggggaagaggggcgtagccgaacacaaccggcataat
gagttccactcctacgaggacctggtggtccacatccccaaagaccacaagcctggcacc
ttccccaaggccctgtccatagagagcctctctcccaccctgggggcctctgtcccctgg
cacactggcagcctcaaccccctggagccccagtccaaccccaactcccaacctaactct
aaccccagggagttccaccactgcccggccacccagtgctgcccacggggcagtaggatc
agtgtgtacgacaacgtccctgggtctcacctctatgcctctactggagacctgctggac
ctggagaaggaagacctgttcccccacctggatgacatcctgcagcatgtcaatggcctg
cagcagatagtggaccactggtccaagaacatgctgccctctgcaggactggacggacag
ggactccagcctgcaggtttgcagtcctccagccagatcacgctggacattgaggggacg
tctgttctggagggacagagcacagccagtgacggggacagagacggcatgtccctcaat
gagactcactgtactggatacagagagaggagggactcaggggtgggagcatcactaacc
agacccaaccgtctgcgatggcccagcttccagatgtccaaccggctcagccacgcagta
gcctcgctccagatcaccaaccaatcagcaggccagctcagcctgctgcagaagttctct
ctcctccgcctcacggccatcatggagaaatactccatgtccaacaaacacggatggacc
tggtcggttccaaagttcatgaagaggatgaaggttccagactacaaggacaagaatgtg
tttggtgttcctctgattgttcatgtccagcgctctggtcagcccctccccctcagcctg
cagcaggccctccgatacctcaggagccagtgtctagaccaggtgggtctgttccgtaag
tctggtgtgaagtctcgtatccaggcgctgaggcagatgaatgaggcatctcctgatgat
gtcagctacgaggaccagtcagcgtacgacatagcagacatggtcaaacagttcttcaga
gacctgcctgaacctctactgaccagcaagctgggagagaccttcctacacatctaccag
tatgttcctaaggaccagcggttgcaggctgtgcaggcggccattatgctgatgtcagac
gagaacagggaggtgctccagatgttgctctgcttcctgtctgatgtcacttcctctgtg
gaggagaaccagatgactcccatgaacattgctgtgtgtctggccccgtccctgttccac
ctcaacatcctgaagaatgacaacctctcacccagggccatgcagaggaagtacgcgaca
ggccggcccgaccagaaggacctgaatgagaaccttgctgcgacgcagggactcgcccac
atgatcatagagtgcaaccgactgtttgagattcctcacgagatggtgactcagtccagg
aagtcatacgtggaggcagaccttcacgctcccaccttaaaggagctctgtagacagcag
gaggaggatgatgtgtcctaccagacagagactagtctcagccagacacacacagagacc
agaccacataacctgtaccagagctacatagagagcaggctccaggagctcctgaaggag
gccagagagaaggctaagtgctgggtgtcctgcaccagttcagacaacactgagctctac
tgtaagaaggtgggtgatgggaaccctttgcggcggtggcgtgtggtggtggaggtggag
gcccctccctcggtggtgttgaaccgcgtgctgcgagatcgccacctgtgggacgtggac
ctgctgcagtggaaggtagctgagactctggacagacacactgaggtgttccactatgtc
ctcaaccgcatgcccccacaccccagcagagacttcctggtcctacggtcgtggaggact
gaccttcccaaggggacgtgtgcattggtgtgtgtgtctgtagaacatgaggactgtccc
cgggtcggtggggtgagggccgtggttctagagtctaactaccttctagaaccctgcggc
tctgggaagtccagactcactcacatctgcagggtagacctcaaggggcggagtccagag
tggtacaacaaggcctttggtcacctctgtgctgctgaagctgctcgcattcgcaactcc
ttccaaccaatcagcacagaggggccagagaccaagatctga
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