Coregonus clupeaformis (lake whitefish): 121567920
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Entry
121567920 CDS
T08357
Symbol
tut1
Name
(RefSeq) speckle targeted PIP5K1A-regulated poly(A) polymerase isoform X1
KO
K18709
speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:
2.7.7.19
2.7.7.52
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121567920 (tut1)
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
121567920 (tut1)
2.7.7.52 RNA uridylyltransferase
121567920 (tut1)
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
121567920 (tut1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
RL
RRM_1
zf-met
TUTase
zf-C2H2_jaz
zf-C2H2_2
RRM_7
Nup35_RRM_2
ANC1_spectrin
Motif
Other DBs
NCBI-GeneID:
121567920
NCBI-ProteinID:
XP_041734246
LinkDB
All DBs
Position
1:36912325..36922657
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AA seq
816 aa
AA seq
DB search
MEDLDKDIRATARGFHCILCNVNVPNKASLDAHVKGRKHVKLSTVRATRKAQVENSVFVS
GIKPDTAQADLVDYFQRFGPVSEVIMDKDKGVYAIVEFSEKDSLQATLSRLEHDMNGLKL
RVKPRENKEFKLIPKKRQDSKNLQQILERLTPELCQTASVNEQMQKVVERFQLGENEKKA
RELLVQLLQEVFTEFFPDSQILAFGSSVNTFDIHSCDLDLFLDLDNTKVFQARAKSSSEQ
HSSSSDALQAGEGPSDDARSEDSILSDIDLSTASPTDVLELVAAILKKCVPGVHKVMPVS
GARLPVVKFIHKELNLQGDVTINNRLAVRNTRFLQLCSGLDSRLRPLVYTIRYWAKQKQL
AGNPSGAGPLLNNYALTLLVIFYLQKCDPPVLPTLDQLKGMACEEEVCVIEGWNCTFPSQ
PIAVPPSKNTQDLCALLSGFFSFYAQFDFASSVISIREGCSLPITSFLSLDKVKGEGAAM
EQERSSGPKLGPLNVLDPFELHHNVAGNLTERSQRSFQRECQEAEKYCRSLQYKRKSTKG
KVWGLVRLFTPRDEGPHPHHHKRAEGAERELAISIPFKAASLPEVVRSQLRSAGDGFRLL
WFQRVCSAVEGVFQGVLKCSLTNTCMGESTGAEGMDTASPIGKSTNNNGEDTSRRASSDC
SPQSKATPGAKRALLSSESSDASVSPQGKRPRLDSYIGPQPGSPRWTYVQRHRVWAGRRK
VRRELLKGVMDMDSRPEGSSVELETQVTQNIVDKEPEDKEPLEFQVQAQVVGGTESTKAM
IKFRPSADCAGLFQDFFHFLEMFLPKMADTLMGKTG
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggaagatttggacaaggacatacgagccactgcgagaggttttcattgcatcctatgc
aatgtgaatgtaccaaataaggccagtctggatgcccatgtgaaagggcgaaagcatgtg
aagctgagcactgtgcgggcgactcggaaggctcaggtggagaacagtgtgtttgtcagt
gggatcaaaccggatacagctcaagccgaccttgtagactacttccaaaggtttggacca
gtgtcagaggtcatcatggacaaggacaagggtgtgtatgctatcgtggagttcagtgag
aaggacagtctgcaggccacgctgtcccggttagagcatgacatgaatggtctaaagctg
cgggtgaaacccagggagaacaaggagttcaaactgatccctaagaagaggcaggattcc
aagaacctgcagcagatactggagcggctcaccccagagctgtgccagactgcttctgtg
aatgaacagatgcagaaggtggtggagcgattccaactgggggagaatgagaaaaaggcc
agagagttactggtgcaactgctccaggaggtgttcacagagttcttcccagatagtcag
atcctggccttcggttcctccgtcaacacatttgacatccactcctgtgacttggatctg
ttcctggacctggacaacaccaaggtgttccaagctcgggccaagagttcttccgaacag
cactcctcttcctctgatgccctccaggcaggggaaggtccgtcggacgacgcccgctct
gaggactccatcctgtccgacatcgacctctccaccgcctcgccgaccgacgtgctggag
ctggtggcggcaatcttgaaaaagtgcgtccctggggtgcacaaggtcatgccggtcagc
ggcgctcgcctccctgttgttaagttcatccacaaggagctcaatctccagggggacgtg
actatcaataacagactggcggtgaggaacacccgtttcctgcagctgtgctcagggctg
gactccaggctgcgccctctggtctacaccatccgctactgggctaaacagaagcagctg
gctggtaatcccagtggtgctggacccttgctgaataactatgctttgaccctgctggtg
atattctatctgcagaagtgtgaccctcctgttctccccacattggaccagctgaagggc
atggcctgtgaggaggaagtatgtgtgatcgaaggctggaactgcaccttccccagtcag
cccattgctgtgccccccagcaagaacacccaggatctgtgtgccctgctgtcgggcttc
ttctccttctacgcccagttcgactttgccagctctgtcatctccatcagggagggctgc
tctctccccatcaccagctttcttagcctagacaaggtaaagggggaaggggcggccatg
gagcaggagaggtcctcaggccctaagctgggccccctcaacgtgctggaccccttcgag
ctgcaccacaatgtggcgggaaacctaacggagcgcagccagagaagctttcaaagggag
tgccaggaggcagagaagtactgccgcagcctgcagtacaagcgcaagtccaccaaaggt
aaggtgtggggcctggtgcgccttttcaccccccgggacgagggccctcacccccaccac
cacaagagggctgagggggcggagagggagctagccatcagcatccccttcaaggcggct
tcgctccccgaggtggtccgcagccagctgcgctctgcaggggatggcttccgcctgctc
tggttccagagggtgtgctctgcagtggagggggtgtttcagggagtcctcaagtgcagc
ctaactaacacatgcatgggggaaagcactggagctgaaggaatggatactgcatcaccg
attggcaaatcaacaaacaacaatggtgaggacaccagccgccgtgcctccagtgactgc
agcccccagagcaaggccaccccgggagccaagagagccctgctgtcctctgagagcagc
gacgcctccgtgtccccgcagggcaagaggcccaggctggacagttacattgggccccag
cccgggtctccacgctggacctacgtccagaggcacagggtgtgggcgggccgtcggaag
gtaaggagggagctgctaaaaggggtgatggacatggactccaggccagagggcagcagt
gtggagctggagacccaggtgactcagaacatagtggacaaggagccggaggacaaggag
ccgctggagttccaggttcaggcccaggtggtgggcggcacagagagcaccaaagccatg
atcaagttccgaccctctgccgattgcgctggactgttccaggacttctttcacttcttg
gagatgttcttgcccaagatggccgacacactgatggggaagactgggtag
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