Coregonus clupeaformis (lake whitefish): 121567937
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Entry
121567937 CDS
T08357
Name
(RefSeq) ribosomal RNA-processing protein 8-like
KO
K14850
ribosomal RNA-processing protein 8 [EC:
2.1.1.287
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cclu03009
]
121567937
Enzymes [BR:
cclu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.287 25S rRNA (adenine645-N1)-methyltransferase
121567937
Ribosome biogenesis [BR:
cclu03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
121567937
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltransf_8
Methyltransf_11
Methyltransf_25
Motif
Other DBs
NCBI-GeneID:
121567937
NCBI-ProteinID:
XP_041734263
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Position
6:40219436..40222669
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AA seq
589 aa
AA seq
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MFAEEDEWNDDPEAKALTKTVISSFKLSGSTNITKSVGKKKSLLRTLQTLGSVPNWSKSN
GAPREAGSDSETEAILTPHTKRKKKRSKRGRKRVAASGEETEKDSGDLGAKEAAVPLAKK
PIKAVFKKVKNTESIQGGSKQDSKSIKDEGKAAADAEIERLNRKQWKNKMKNKKKCQNKF
KIQNGENTTPPKTTKAVTTVQKDTEDGPKSASDVNRETAVVQTQQRQTKKNKQEKEGECK
TQKRKKVPEGKGMTFTETASTPGTEIVQNNKNFSEKKTKGGSQVKAVPLGKELKTEEEKP
QEVVRAEQHPEPSGSKRRKREASKGQDRRREKLRRMLHGQSPEKKEQPAEQEEEIRTTEE
VKEAPADRSAALRSRMEQRLESARFRYINEVLYTTSSGEAKRMFRQDPQAFSIYHRGFTA
QVQHWPANPVDAIISYIRHKPASLVVADFGCGDCKIALSVKNKVHSFDLAPICDRVTVCD
MANIPLKDGTVDIAVFCLSLMGTNLGDFLVEANRVLVMGGILKIAEVASRFENVRNFMGA
LSSLGFKLVTKDTENSHFYSFEFEKIAEAPDRVKKAGGLELRPCLYKKR
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgttcgctgaggaggatgagtggaacgatgacccagaagccaaagctctgaccaagact
gtcatcagcagtttcaaactgtctggcagtaccaatatcacgaaaagtgttgggaagaag
aagagtttgttacggaccctccaaacactggggtcagtaccaaactggagcaagagcaat
ggtgcccctcgggaagcaggcagtgacagtgaaacagaggccatactgacaccacacacc
aagaggaagaagaaaagaagcaaaagaggacgcaagagagtagctgcttcaggagaagag
actgagaaagacagtggagatctgggtgccaaggaggctgcagtgcctttagctaagaag
ccaataaaagcagtgttcaaaaaggtaaaaaatacagagtccattcagggtggtagtaaa
caagattcaaaatctatcaaggatgaaggaaaagctgcagcagatgctgagattgagaga
ttaaaccgaaagcaatggaaaaacaagatgaagaacaagaagaaatgtcaaaacaaattc
aaaattcaaaatggagagaataccacacccccaaaaaccacaaaagcagtgaccactgtg
caaaaggatacagaagatggaccaaaatcagcttctgatgtgaacagggaaacagcggtt
gtccagacccagcaacgccagacaaagaaaaacaaacaggagaaagagggtgagtgtaaa
acacagaaaaggaaaaaggtcccagagggaaaagggatgactttcactgagactgcttcc
actccaggcacagaaatagtccaaaacaataagaacttttcagagaaaaagacaaagggg
ggcagtcaagtaaaagcagtcccactaggtaaagagttaaagacggaagaggagaaacct
caggaggtggttagggcggagcagcacccggagccgtctggcagtaagagaaggaaacgg
gaggcgagcaaagggcaggaccgtaggagagagaagctcaggagaatgctgcatggccag
agcccggaaaagaaagagcaacctgcagagcaggaggaggagatacgcaccacagaggag
gtgaaagaggctcctgcagaccgctcggctgctctgaggtcccgcatggagcagcgtttg
gagtcagcacggttccgttatattaacgaggttctgtacaccacgtctagtggggaggct
aaacgcatgttcagacaggacccccaggcttttagcatctaccacaggggcttcacggca
caggtacagcactggccagctaatcctgtcgacgccatcatctcctacatacgccacaag
cctgcctctctggtggtggcagatttcggctgtggcgactgcaagatcgctcttagtgtg
aagaacaaagtgcacagttttgacttggcacctatctgtgaccgtgtaactgtctgcgac
atggctaatataccgctcaaggatggcactgtggacatagctgtattctgtctctctctt
atggggaccaaccttggggattttctagttgaggctaaccgtgtgctggtgatggggggt
atcctgaaaattgcagaggtggcaagtagatttgagaatgtgcggaacttcatgggtgct
ttgtccagcctgggattcaagttggtcacaaaggacacagagaatagccacttttactcc
tttgagtttgagaagatcgcagaagctccagatagggtaaagaaggcaggaggactggag
ctgaggccttgtttgtacaagaaacgatga
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