Coregonus clupeaformis (lake whitefish): 121567938
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Entry
121567938 CDS
T08357
Name
(RefSeq) nectin-3-like protein
KO
K06592
poliovirus receptor-related protein 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04514
Cell adhesion molecules
cclu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121567938
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121567938
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121567938
04090 CD molecules [BR:
cclu04090
]
121567938
Cell adhesion molecules [BR:
cclu04515
]
Immunoglobulin superfamily
Nectin family
121567938
CD molecules [BR:
cclu04090
]
Proteins
121567938
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
C2-set_2
ig
V-set
Ig_2
I-set
MINT_RID
C1-set
Keratin_assoc
Motif
Other DBs
NCBI-GeneID:
121567938
NCBI-ProteinID:
XP_041734266
LinkDB
All DBs
Position
6:complement(40279614..40367960)
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AA seq
557 aa
AA seq
DB search
MAKRLLLDYHKTLPLNGLQAATVLLLIYGFTCVSSNEVLVPEMVSAVLGKNITLGCRVEV
GTNLSLTQSSWERRLPSGTITLAVFNPQFGISISPDYARRLSFLNPSVHDATIVLEGVGF
QDIGSYTCKVATFPLGNTQASTTVNILVEPKVYVSAGSTALVDGGNESVAATCIAERGRP
AAEVSWETELFGHSVVQTQDEPNGTSTTQVLYVLEPRRHSQGHTLTCVVRHPALQTEFRI
PYVLNVQFAPEVTVVGYDQNWFVGQENVKLDCGAKANPPAHHFSWTRLDGPMPDGVDILN
NTFSFTRPLERNDSGLYRCEVSNDIGPRSQDVHVWIQDPPPTTAPVPTTSTPLFLDTSDT
STAPNKRRGASGHFTSPTLASLSDSSLGTIVGGAVGGVLLLVLLLILGGACFMRQRRTFR
GDYYTKQYLGPSDMQKESQLDVLQPHELQEVYGDGQNSTCKELKPKPGGDIIYPNDYPND
IKDREDWGDGHRGLREGSYQPAENHNNIHHPRGLPVQTPTVTNGSPYLPEDCYDNGTDSE
YVSHMDGSVISRREWYV
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaagattgctactcgattaccacaagactctgccgctcaatggactgcaagcc
gccacagttttgcttctcatttatgggtttacctgtgtgagcagtaacgaggtgctggtc
ccagagatggtgagtgctgtgctggggaagaacattacactgggctgcagggtggaggtg
ggcaccaacctcagcctcacccagagctcctgggagcgtcgcctgccctcaggcaccatc
accctagccgtcttcaacccccagtttggcatctccatctccccagactacgccaggcgc
ctgtccttcctgaacccctccgtgcacgatgccaccatcgtcctggaaggcgtgggtttt
caggacatcgggtcttacacgtgtaaagtggcgactttcccgctgggcaacacgcaggca
tccaccaccgtcaatatactagtggagcccaaggtctacgtctccgccggctctacggcc
ctggtggatggtggtaatgagtcggtggcggccacctgcatagcggagcgcggccggcct
gcagccgaggtgtcatgggagactgagctgtttggccactctgtggtccagacgcaggac
gagcccaacggcacctccaccacccaggtgctctatgtgttggagccacggagacactcc
cagggccacaccctcacctgtgtggtgcgccacccggccctgcagactgagttcaggata
ccctacgtgctcaatgtgcagtttgctcctgaggtgacggtggtggggtatgaccagaac
tggtttgttggtcaagagaatgtgaagctggactgtggagccaaagcaaacccacctgcc
caccacttctcctggaccaggttggatgggccgatgcctgacggtgtggatatattgaac
aacacttttagtttcactcgtcctctggagagaaatgactctggactgtacaggtgtgag
gtgtccaatgacatcggtccacgcagtcaggacgttcacgtctggatacaagatcctccc
cccaccacggcaccagtccccaccacctctactcccctcttcctggacaccagtgacacc
agcacggctcccaacaagcgacgaggagcgagcggccacttcacctcccccaccctggcc
tccctgtcagacagcagcctgggtaccatagtgggcggggccgtgggcggggtcctgctc
ctagtgctgctgctgatcctgggcggagcctgcttcatgcgccaacggaggaccttcagg
ggggactactacaccaagcagtacctgggcccctccgacatgcagaaggagtcccagctg
gacgtgctccagccacacgagctgcaggaggtctacggggacgggcagaactctacctgc
aaggagctgaaacccaagccgggaggggacatcatttaccccaacgactaccccaacgac
atcaaggacagggaggactggggcgacggccacaggggcctccgggagggcagctaccaa
cctgctgagaaccacaacaacatccaccaccccagagggctgcctgttcaaacccccaca
gtgaccaacggctccccctacctgccggaggactgctatgacaatggcacagacagcgaa
tatgtgtcccacatggatgggtctgtgatctcacgcagggagtggtatgtctga
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