Coregonus clupeaformis (lake whitefish): 121567982
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Entry
121567982 CDS
T08357
Name
(RefSeq) suppressor of cytokine signaling 5
KO
K04698
suppressor of cytokine signaling 5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121567982
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
121567982
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Gene cluster
GFIT
Motif
Pfam:
SH2
SOCS
SOCS_box
Motif
Other DBs
NCBI-GeneID:
121567982
NCBI-ProteinID:
XP_041734348
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Position
6:21858250..21863174
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AA seq
553 aa
AA seq
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MSQLKESGDRGKDRERGARPKVRQSRSEERRDAGGGQKGGRGKKKGQTSHQQAAARPVSD
GFEYGDLLSGLEPRDRCFSSPLKEGRRWQGLEGVTSLSQDRGTARLAQGTAEPPASEAEG
RGAGGSRTLRQKIQDAMGQCFPIKTNTPLPSSSSSTQQVFMPQAAAAGAASSSRRKIHLT
ELMLDDCPFAAGTELAQKWYLIKQHTAPISTPPVVDTLVVSTSASASNMAAVVEDVDDRL
RERRRISIEQGVEPPPNAEIHTFEVTARINPLYKLGPKLAHGMNELAVDDRATIHQQQQL
LLQRQQQHQLLLQSCLDTLDEVVAVASSSSASASALVPVCEAASVPDPVVDPEVTVSLQP
TRAVIPQTEGPPTQDGYRIHTQIDYIHCLVPDLLQITNLPCYWGVMDRYEAETLLEGKPE
GTFLLRDSAQEDYLFSVSFRRYGRSLHARIEQWNHNFSFDVHDPSVFHAPTVTGLLEHYK
DPNSCMFFEPLLSNPIHRTQPFSLQHVCRAVISSRTTYDGINVLPIPYTLKKHLKEYHYK
QRVRVRRMDTWWE
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaactgaaagagtcaggtgatcgtgggaaagacagggagcggggcgcccgtccc
aaggtgagacagagccggtctgaggagagaagagatgccggcggggggcaaaaaggagga
agaggaaagaagaaaggccagacgtcccatcagcaagctgcggcgcggcctgtcagcgat
ggctttgagtatggggacctgctgagtggactggagcccagggaccgctgcttctcctct
cccctgaaggagggcaggagatggcagggcctggagggggtcacttcactcagtcaggac
agggggacagccaggctggcacaggggacagctgagccaccagccagtgaggctgaaggc
aggggggcaggtggcagtcgcacactccgccaaaagatccaggatgccatggggcagtgt
ttccccataaagaccaacactccattgccatcgtcgtccagttccactcagcaggtcttt
atgccacaagctgctgctgccggggctgcctcctcctcgcgccgcaagatccaccttact
gaactcatgctggacgactgtccctttgctgcaggcaccgagctggctcagaagtggtac
ctcatcaagcagcacacagcccccatctccacacctcccgtagtggataccttggtggtc
agcactagtgcctctgcctcaaacatggctgccgtggtggaggatgtggatgacaggttg
cgagagcgcaggcgcatcagcatcgagcaaggcgtggagccgccgcccaatgcagagatc
cacacgtttgaggtgacggcccggatcaaccctctgtacaagctggggcccaaactggcc
catggtatgaatgagctggcagtggacgatagggctaccattcaccagcaacagcagctg
cttctccagaggcaacagcagcaccagctcctcctgcagagctgtctggacactctggat
gaggtggtggctgtggcctcctcctcttctgcctcagcgtctgccttggtccctgtctgt
gaggctgcttctgtccctgaccccgtggttgaccctgaggtcacagtcagcctccagcca
accagagctgtcatcccccagactgagggtccccctactcaggacggctatcgcatccac
acccagatcgactacatccactgtctggtgcctgacctgctgcagatcactaacctaccc
tgctactggggtgtgatggaccgctatgaggcagagactctgctggagggcaagccagag
ggcaccttcctcctccgcgactcagcccaggaagactacctcttctctgtcagcttccgc
cgctatggccgctcgctgcacgcccgcatcgagcagtggaaccacaacttcagctttgac
gtgcatgaccccagtgtgttccacgcacccaccgtcacgggcctgctggagcactacaag
gaccccaactcctgcatgttctttgagcctctgctgtccaaccccatccaccgcacccag
cccttcagcctgcagcacgtgtgcagggcggtgatcagcagtcgcaccacctacgatggc
atcaacgtgctgcccatcccctacaccctgaagaaacacctgaaggagtaccattacaag
cagagggtgagggtacggaggatggacacctggtgggaataa
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