Coregonus clupeaformis (lake whitefish): 121567987
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Entry
121567987 CDS
T08357
Name
(RefSeq) zinc finger and BTB domain-containing protein 16-A-like
KO
K10055
zinc finger and BTB domain-containing protein 16
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121567987
04121 Ubiquitin system [BR:
cclu04121
]
121567987
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
121567987
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
121567987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
BTB
zf-C2H2_6
zf-met
zf-C2H2_jaz
zf-C2H2_15
zf-C2H2_8
dbPDZ_assoc
zf-C2H2_2
DUF7129
Motif
Other DBs
NCBI-GeneID:
121567987
NCBI-ProteinID:
XP_041734362
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Position
6:complement(22178139..22238640)
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AA seq
650 aa
AA seq
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MGVLQLHNPTLPATLLQRANHMRLSGTLCDVIITVDGQEFPAHRTVLACTSKMFEILFHR
SSLHYALDFLSPKTFQQILEYAYTASLQATDEDLDDLLYAAEILEIEYLEEQCLKVLETI
QSEEKQDHLSLSGRNHGSGESEHGRARHWRNMLISKKHSMQEGGINPTALHHLALYHMTD
RSPSGPGGLPMGLPVASPTQDGGVSLEGLGQSPLQYSLNGAQDPSLPLAKRIKTEDNNMQ
VDEANGYEGRSSSGGEGGCESDQPRDEGSGTPQRSSVITSAREQHSGQEEGGIVGNNSPL
DSFPGLAEKHMASLYSSMPSNHVGEVGQPMPMSVAPSLAMSLDLRAYGGLLPQGLLHREI
LSRLGQFAAGMRREGQSQTQSCRDCGLQLHDREAMEQHRKLHSEGEKGHGCEFCGKRFTD
SVRLRMHMLSHSAGAEALVCDQCGATFSAEDALEAHRQTHTGTDMAVFCLLCAKRFQTQK
ALQQHMEVHAGMHSYVCSHCDHPFPSHTTLKRHLRSHTGDHPFECEFCGSCFRDDGMLRG
HKRIHTGEKPYECNGCGKRFSLKHQLETHYRVHTGEKPFECKICHQRSRDYSAMIKHLRT
HNGASPYQCTICQDFCPSLAAMQKHMKSHRPEDVPPDWRIEKTYLYVCYV
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttctccagctccacaaccccaccctccccgccacgctcctgcagagggccaat
catatgcgtctgtcgggaacgctgtgtgacgtcatcatcacagtggacggccaggagttc
ccggcccaccgcaccgtcctggcctgcaccagcaagatgtttgagatcttgttccatcgc
agcagcctgcactacgccctcgacttcctctcccccaagaccttccagcagatccttgag
tacgcctacacggcctccctgcaggccacggacgaggacctggacgacctgctgtacgcc
gctgagatcctggagatcgagtacctggaggagcagtgcctcaaggtcctggagaccatc
cagtcagaagagaagcaggaccacctgagtctgagtgggaggaaccacgggtctggagag
agcgaacatggcagagcaaggcactggaggaacatgctaatctccaagaagcattccatg
caggagggtggtatcaaccccaccgccctgcaccacctggcactgtaccacatgactgac
aggagtccctctgggccagggggactacctatggggctccctgtagccagccccacacaa
gatggaggggttagtctggagggcctgggtcagtctccactgcagtacagcctcaatgga
gcccaggacccctcccttcctctggctaagaggataaagacagaggacaataacatgcag
gtggatgaagccaatggctacgaaggccggtcctccagcggaggggaggggggatgtgag
tcggaccagcccagagatgagggctcggggaccccccaaagaagcagtgtcatcacctca
gctagagagcagcactcgggccaagaggaggggggcatagtggggaacaactctcctctg
gacagtttccctggtctggctgagaaacacatggcctccctctactcctctatgccctcc
aaccacgtaggggaggtggggcagcctatgcccatgtcggtggctccttccctggctatg
tccctggacctgagggcctacgggggactgctgccccagggcctgctccacagggagatc
ctcagcaggctgggccagtttgcagcagggatgaggagggagggccagagtcagactcag
agctgtagggactgtggtctccagctgcacgacagagaggccatggagcaacacaggaag
ctgcacagtgaaggagagaagggacacggctgtgagttctgtggcaaacgcttcacagat
agtgtacggctcaggatgcacatgctctctcactcagctggagctgaggccctggtgtgt
gatcagtgtggagctacattctctgctgaagatgctctggaggcccacagacagacacac
acagggacagacatggcagtgttctgtctgctgtgtgccaagcggttccagacccagaag
gctctgcagcagcacatggaggtccatgcagggatgcacagctacgtctgcagccactgt
gaccaccccttccccagccacaccaccctcaaacgccacctgcgctcacacacaggtgac
cacccgtttgagtgtgagttttgtgggagctgtttccgggacgatggcatgttgagggga
cacaaacgcatccacacaggagagaagccttatgagtgtaacggctgtggcaaaaggttc
agcctcaagcaccagctggagacccactaccgcgtacacacaggtgagaagccatttgag
tgcaagatctgtcaccagcgatccagggactactctgccatgatcaagcacctgcgcacc
cacaatggagcgtcgccctaccagtgtaccatctgccaggacttctgccccagcctggca
gccatgcagaaacacatgaagagccacagacccgaggatgtgcccccggactggagaata
gagaagacctacctgtacgtatgctacgtctga
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