Coregonus clupeaformis (lake whitefish): 121568061
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Entry
121568061 CDS
T08357
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121568061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121568061
04131 Membrane trafficking [BR:
cclu04131
]
121568061
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121568061
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121568061
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
121568061
mRNA cycle factors
P-body specific factors
121568061
Membrane trafficking [BR:
cclu04131
]
Others
Actin-binding proteins
Myosins
121568061
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
121568061
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
121568061
BRITE hierarchy
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_22
nSTAND3
AAA_16
DUF5779
Myosin_N
Motif
Other DBs
NCBI-GeneID:
121568061
NCBI-ProteinID:
XP_041734563
LinkDB
All DBs
Position
6:complement(49085141..49121564)
Genome browser
AA seq
1869 aa
AA seq
DB search
MAASELYSKYARVWLPDAVEAWKPAELTKDYNPGDRALCLQLEDGTNVEHKIDPQTNSLP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESKMIYTYCGIVLVAINPYESIPIYD
HDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDQRNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSSSEANVEERVLASSPIMEAIGNAKTTRNDNSSRFGKYIEIEFDKNYRIIGANMR
TYLLEKSRVVFQATEERNYHIFYQLCASSHLPEFKTLQLGSADDFHCTNQGGSPAIEGVD
DAKEMCSTRKAFSLLGINETYQMKLFQILAAVLHLGNVEVKDRTADSSNIPPDNSHLIVF
CELMGVAYQDMSHWLCHRKLKTATETYVKPLPKVHAVTARDALAKHIYAKLFSWIVDHIN
EALRSAVKHHSFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNHPCINLIEAKMGVLDLLDEECKMPKGSDDTWAQKLYNTFLKKSDLFDK
PRLSNKAFIILHFADKVEYQCDGFLEKNKDTVNEEQINVLKLSKFDLLLELFSDEEKTTC
PPASRSKMTRPVQAQRDHKKTVGTQFRNSLHLLMETLNGTTPHYVRCIKPNDLKSPFTMD
PMRAVQQLRACGVLETIRISAAGFPSRWTYQEFFNRYRVLMKQKDVLSDRKRTCRNVLEK
WVQDQDKYQFGKNKIFFRAGQVAFLEKLRSDKLKAACVRIQKSIRCWLARKRYLRMRRAA
ITIQRNTRGHQARCLVAFLRRSRAAVIIQKNQRMVVSRRCYLQQRSAAIAMQRLLRAYQA
RQIYHKLLYEHKVITIQRWVRGWLARRRCRRSLGAVVYLQSCMRRMAARRELRKLKVEAR
SVEHFKKLSVGMENKIMQLQRKVDEQHKENRELSERLRTVERSRAAESERLGREVERLRV
AEEESRFKADGVPSLLEQLSFLHQELETTRGEKKAVEEGARTYREDTEKVVSELNENNSL
LMTANGDLNQLIQDQSQQIAETQAHAKDRKQLERDLSEERDRYQSLLSEYRQLEERHADL
KEEMNLSMITSKPGHRRTDSNYSSNESEGTPSSGFAESEGRNSSVETHSSTRSSSGFTES
ETRSLRGEDAVDMSVLLKLQRRVTELEQDRQTLQRHLDKREETQQVQAKNAEAQRTAGRA
ELDLEALKRQELESENKKLKTDLTELRQSLATVSNASTGASPGAKTTTSPGAKTTTNPRA
KTTTSSPGPGSAPYNVLLEQLNSSNEELEVRKEEVLLLRSHMVRQEALKHNKEAYGEMHK
MIHLGETPPKETDGSTPDYHKLNEDGELWLAYEGLKETNRLLVSQLQVQDRRHEEEMEEL
REEVLRVREENRQQQQFLSQSLLLPQEARLEASMHHEITRLTSDNLDLMEQQGKQDKMIR
KLKKQLKVYAKRVEEYEVESGQMERVAPGPGPGPCSPGRITRKERDFQGMLEYRRGDEGK
LLKSLVVELKPRGVAVNFLPGLPAYILFMCLRHADYSNDDQRVSILLNSTINSIKGVLKR
RGDDFETVSFWLANTCRFLQCLKQYSGEEAFVKNNTPQQNEHCLCNFDLSEYRQVLSDLA
IQNYQQLARCMEETLQPMIVPGMLEHENFQGVLGSKPTGLRKRTSSFPGEAVYTVDSILQ
QLSLFHATLSQHDVDPELIKQGVRQQFYIICSVTLNNLLLRKDMCSWSKGLQIRYNVWQL
EEWLEEKGLSDCGAKEMLEPLIQAAQLLQVKKKTEEDAQAICTMCSALTTAQIVKVLNLY
TPVIEFEERVSISFIATIRALLKGRVESPLLLMDTKKILSVTFPFTHSPLALETIQIPSS
LNLGFLTRV
NT seq
5610 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgtctgaactgtactccaagtatgcccgggtctggctcccagatgctgtggag
gcgtggaagccagcagagctcaccaaggactacaatcctggagacagggctctgtgtcta
cagctggaggatggaacaaacgtggaacacaagattgacccccagaccaacagtttacct
cctctaaggaaccctgatatcctggttggggagaacgacttgacagctctcagctacctc
catgaaccagccgtactgcacaacctcaaagtgcgcttcgtggagtccaagatgatctac
acctactgcggcatcgtgttggttgctatcaacccctatgagagtattcccatctatgac
catgacatcatcaatgcctacagtggacagaacatgggcgatatggaccctcacatattc
gctgtggcagaggaggcttacaaacagatggccagagatcagaggaaccagtccatcata
gtgagtggggagtctggggctggtaaaacagtctctgctaagtatgccatgcggtacttt
gctacagtcagcgggtcgtccagcgaggctaatgtggaggagagagtgctggcctccagc
cccatcatggaggccatcggaaatgcaaagacgactagaaacgacaacagcagtcgattt
gggaagtacatcgagattgaattcgacaagaactatcgcatcatcggggccaacatgagg
acgtacctgctggagaaatctagagtggtgtttcaggctaccgaggagaggaactaccat
atcttctaccaactgtgtgcctcctcacacctacccgagttcaaaaccctccagttaggc
agcgctgatgacttccactgtaccaaccagggaggcagccctgccatagagggagtagac
gatgccaaagagatgtgcagcaccaggaaggctttctcgttgttaggaatcaatgaaaca
taccaaatgaaacttttccaaatcctggcagctgtgcttcaccttggcaatgtggaagtg
aaagacagaactgcagacagcagcaacatcccgcctgacaatagtcacttgatagtgttc
tgtgagctgatgggcgtggcctaccaggacatgtcccattggctgtgccacaggaaattg
aagactgccacggagacctacgtcaagcccctccccaaagtgcatgcggtcactgcacgg
gacgccctggccaaacacatctacgctaaactcttcagctggatcgtagaccacatcaac
gaggctctgcgctctgccgtcaaacaccactccttcattggggttctcgacatctatggg
tttgaaacgtttgacatcaacagctttgagcagttctgtattaactatgccaacgaaaag
ctccaacagcagtttaacatgcatgtgttcaagctggagcaggaggagtacatgaaggag
cagattccctggacgctgatagacttctatgacaaccatccctgtatcaacctcatcgag
gccaagatgggtgtcctggacctgctggacgaggagtgcaaaatgcccaaaggctctgat
gacacatgggctcagaaactttacaacaccttcttgaagaaaagtgatctttttgacaaa
cctcgtctgtccaacaaagcctttatcatcctccactttgcagacaaggtggagtatcag
tgtgacgggttcctggagaagaataaggatactgtcaatgaggagcagattaatgtgctc
aagctaagcaagtttgatctgctgttggagctgttcagcgatgaggagaagactacatgc
ccccctgccagtcgcagtaagatgacacggcctgttcaggctcagagagaccacaagaag
accgttggaacgcagtttcgtaactctctacatctgctgatggagactctgaatggaacg
acccctcactatgtacgctgcatcaagcccaacgacctcaaatccccattcacgatggac
cccatgagggcggtacagcagttacgggcttgtggagtcctggaaaccatccgcatctca
gcagcaggcttcccatccaggtggacctaccaggagtttttcaaccggtaccgggttctg
atgaaacagaaggacgttctctcagacaggaagcggacctgcaggaacgtcctggagaaa
tgggtccaggaccaggacaaataccagtttggcaagaacaagatcttcttcagggcgggt
caggtggcctttctagagaagctgcgttctgataaactgaaggcggcgtgcgttcgcatc
cagaagtccatcagatgctggctggccaggaagaggtacctccgtatgagacgagctgcc
atcaccatacagagaaacacgcgaggccaccaggcccgctgcctggtagcgttcctgagg
aggtccagagcagcagttatcatccagaagaaccagcgtatggtagtgtccaggagatgc
tacctgcagcagaggtctgcagccatcgccatgcagcgtctgctacgagcctaccaggcc
agacagatctaccacaagctgctgtacgaacacaaggttatcaccatccagaggtgggtg
agaggctggctggccaggcggaggtgcagacgctccctgggggccgtggtctacctccag
agctgtatgagacgcatggcggccaggagggagctgaggaagctaaaggtggaggcccgc
tccgtagaacacttcaagaagctcagtgtgggcatggagaacaagatcatgcagttgcag
aggaaggtggacgaacagcacaaggagaaccgagagctcagtgagaggttgaggaccgtg
gagcggtcccgggcagcggagagcgagaggctggggagagaggtggagcgactgcgcgtg
gcagaggaggagagcaggtttaaagcagacggggtcccctccctcctggaacagctgtca
ttcctccaccaggagctggagaccaccaggggagagaagaaggccgtagaggagggggct
agaacatacagggaggacactgagaaggtggtgtcagagttgaatgagaacaacagcttg
ttgatgacagcgaacggtgatctgaatcagctgatccaggatcagagccagcagatagca
gagacccaggcccatgctaaagaccgtaagcagctggagagggatctcagcgaggagcgt
gaccgctaccagagtctactgagtgaatacagacagctagaggagagacatgctgacctg
aaagaagagatgaatctcagcatgatcaccagtaaaccaggccacaggagaacagactcc
aactacagcagcaatgagtccgagggaactcccagctctgggtttgcagagtccgaggga
agaaacagctcagtggaaactcacagctcaacacgcagctcctcagggttcacagagtcc
gagacaagatctctacgaggagaggatgcggtggacatgtcagtcctgttgaagctgcag
aggagagtcactgagctggagcaggacagacagacactgcagagacacctggataagaga
gaggagacgcagcaagtccaggccaaaaatgcagaggcgcaaaggactgcagggagagct
gagctggacctggaggctctgaaacgccaggagctggagtcagagaacaagaagctgaag
acagacctgactgagctgcgtcagtctctagctacggtctccaacgctagcactggagcg
agccccggggctaagaccaccaccagccccggggctaagaccaccaccaaccccagggct
aagaccaccaccagcagccccgggccgggctccgctccctacaacgtgctcctggagcag
ctcaactcctccaacgaggagctggaggtcaggaaggaggaggtgctgctcctccgctcg
cacatggtccgccaggaggcgctcaaacacaacaaggaagcttatggagagatgcataag
atgattcatcttggtgaaactccacccaaagagactgatggatccactcctgactaccac
aagttgaacgaggatggagagctgtggctggcttatgaagggttaaaggagaccaacaga
ctgttggtgtctcagctgcaggtgcaggacaggaggcatgaggaggagatggaggagctg
agagaggaggtgctcagggtgagggaggagaacaggcagcagcaacagttcctctcccag
agcctcctgctcccccaggaggcccgcctcgaggccagcatgcaccacgagatcacacgc
cttaccagcgacaacctggacctgatggagcagcaggggaagcaggacaagatgatccgc
aaactcaaaaaacagctcaaagtctacgccaagagggtggaagaatacgaagtagaaagc
ggtcagatggagagggtggctccaggtccaggtccagggccttgctctcctggtcgtatc
acccggaaggagagggacttccaaggcatgctggagtaccggaggggggatgagggcaaa
ctgctgaagagtctggttgtggagctgaagcctcgcggtgtggcggttaacttcctccct
ggtctgccggcctacatcctgtttatgtgtctgagacatgctgactactctaatgatgac
cagagagtcagcatcctgctcaactctaccatcaacagcatcaagggagtcctcaagagg
cgaggagatgactttgagactgtgtctttctggctggccaacacctgtcggttcctacaa
tgcctaaagcagtacagtggagaggaggcatttgtgaagaacaacaccccgcagcagaat
gagcactgcctgtgtaactttgacctgtcagagtaccgtcaggtcctcagtgacctggcc
atccagaactaccagcagctggccagatgcatggaggagaccctgcagcctatgatagtt
ccaggtatgctggagcatgagaacttccagggtgtcctggggtccaaacccacgggccta
cgaaagaggacgtccagtttcccgggagaggctgtttacacggtggacagcatcctacag
caactcagtctcttccacgctaccctgtctcagcatgacgttgaccccgagctcatcaaa
cagggggtgaggcagcagttctacatcatctgttctgtcactctcaacaacctgctgctg
aggaaggacatgtgctcctggagtaaaggactgcagatcaggtataacgtgtggcagctg
gaggagtggcttgaggagaaggggctgtcagactgtggcgctaaagagatgctggagcct
ctgattcaggctgctcagttgctacaggtcaagaagaagacggaggaggacgcccaggct
atctgcaccatgtgctctgccctcaccacagcgcagattgtgaaagtgctaaacttgtac
accccagtgattgaatttgaggaacgggtttcgatatcattcattgcaaccatacgggcc
ctgttgaaaggccgtgttgagtccccactgcttcttatggacaccaagaagatattgtct
gtgacgtttcccttcacccactctcccctggctctggagaccattcagatccctagcagt
ctgaatctaggattcctcacacgggtctaa
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integrated database retrieval system
