Coregonus clupeaformis (lake whitefish): 121568062
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Entry
121568062 CDS
T08357
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121568062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121568062
04131 Membrane trafficking [BR:
cclu04131
]
121568062
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121568062
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121568062
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
121568062
mRNA cycle factors
P-body specific factors
121568062
Membrane trafficking [BR:
cclu04131
]
Others
Actin-binding proteins
Myosins
121568062
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
121568062
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
121568062
BRITE hierarchy
Motif
Pfam:
Myosin_head
DIL
IQ
Csm1_N
Myosin_N
nSTAND3
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
121568062
NCBI-ProteinID:
XP_041734565
LinkDB
All DBs
Position
6:complement(49050837..49083006)
Genome browser
AA seq
1740 aa
AA seq
DB search
MALSELYTKYNRVWIPDAEHVWKSAEILSDFKPGDDTLQLQLEDGTEMLYPLDTSSPQLP
HLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESKIIYTYCGIILVAVNPYKQLHVYG
DAVIHAYSGQNMGDMDPHIFAVAEEAYKLMARNNKNQSIIVSGESGAGKTVSARYAMRYF
AMVSKSDSNTHVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDRRYQIIGANMR
TYLLEKSRVVSQSESERNYHIFYQMCACADQPEFKSLRLLRADEFRYTNMGGETGIEGVD
DRKDMEETRRTFSLLGLTEDFQADVFKVLAGILHLGNVEIRNVGSDKSSVSSSDPHMAAF
CDLLGVSPDGVTRWLCHRRFVMVTETVVKPVTRKRAVNARDALAKQIYSHLFDCVIHKIN
AALQVPGKQHSFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
DIPWTLVDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDQNWLQKLYNYLADNPLFEKP
RMSNEAFIIQHFADKVEYQCWGFLEKNRDTLYEELVDTMRTSKFPLLANFFLEEEPGGVG
SKGIKVRPARPGVKPANKNHRTTVGEKFRSSLYLLMETLNATTPHYVRCIKPNEEKIPFE
YDSKRVVQQLRACGVLETIHISAQSYPSRWTYIEFYSRYSVLMSQQELRLDDKKHTCRTV
LQRLIQDSNQYKFGRTKIFFRAGQVAYLEKLRLDRLRGACVTIQKHVRGWSHRRKFLRMR
DAAIVLQQYVRGQRQIRKSVTAAALKQGWAAVVIQRYWRGYLTRQIYRMVRSSSITIQAF
TRGWIARKRYKKMVEVQKALILQKYARAWLARRRFQTLRRLVHNVQLSYRCQQLRKKLED
QGKENRGLLERLTSLAGVHAQGLDKLHSLEAQLGKSATEKASLEEREKKSKEDATKTIAQ
LQQEKDRFIVEKQDLEKKLADSATEMKDRFDQIKTTLKEDLEREERLRKIAENNLELQKE
DHEKEVEVLREENRRLKEERVRLQRQLEEEAQVNTELQDQVIQLTKHVKVIPELRKDLHN
LQTQRDDLDRRMKEQSEQAKAKMSVITRQLLGGMVEEEVISRLTSDGPDQIYEVGDLLTA
FDGLQKATRVLENRQREQKEGYDSQVEGLAFKVEHLQKENSQLQKLFREKTSVNDAIGQE
VARLNQENMVIPELRQQVSELQRHKQEVEVQLEEQAREMTEKIEEISKKLQMNVEEEGSQ
RRLLKQHEEVEREKEEVERRVEELEEVIRRQKNTESEAKTRFSQEASRLTAENMDFEEQL
DTKDRLIRKLQNQIKSLQTSEKANQTPAPTIPKEYLGMLEYKREDEPKLIQYIILDLKPR
GVVVNMIPGMAAQLLFMCVRHADYLNDGAKLKSLMNGIISGVKKVITDHQADFELLSFWL
SNMYHMLNCLKQYSGEEEFMKQNTPRQNKNCLQNFDLSEHRQIFSDLAIRIYHQFISVME
KALLPMIVPGMLEHESLQGISSMKPTGFRKRSNSIYEDQEVYTISSLLQQLSLYHSTMSQ
HGMEGVLVRQAVKQIFFLVGAATLNNILLRKDMCSCRKGMQIRCNISYLEEWLKEKDLLQ
GTSAMETLKPLSQAAWLLQVNKTTDDDAKEIIEQCSELNTVQIVKILNSYTPIDDFEKRV
APSFVRKVQGLLQDREGGSSQLMLDTQYHFQVTFPFTPSSQALELLQLPSSLRLSFLTRI
NT seq
5223 nt
NT seq
+upstream
nt +downstream
nt
atggctttgtcggaactttacacgaagtacaacagagtgtggataccggatgcagagcat
gtctggaaatcagcagagatcctgagcgacttcaaacctggagatgatactttacaactg
cagcttgaggatggcactgagatgctttaccccctggacacatccagtcctcagctccct
cacctccgcaaccctgatatcctggttggggagaatgacttgaccgctctcagctacctc
catgagccggccgtactgcacaacctcaaagtgcgcttcgtggagtccaagatcatctac
acctactgcggaatcatcctggtggctgttaatccatacaagcagcttcacgtctatggc
gatgcagtcatccatgcgtactctggacagaacatgggagatatggaccctcacatattc
gctgtggcagaggaggcttacaaactgatggccaggaacaataagaaccagtctatcata
gtgagtggtgagtctggagcgggaaagactgtgtctgctagatacgccatgaggtacttc
gctatggtcagcaagtctgacagcaacacgcatgtggaagacaaagttctggcatccaac
ccaataactgaggctataggaaatgccaagacgaccaggaacgacaacagcagtcgcttt
gggaagtacacagagatcagcttcgacaggagatatcagatcatcggggccaacatgagg
acgtatctcctggagaaatctagagtggtttcccagtcagagagtgagagaaactaccac
atcttctaccagatgtgtgcctgtgcagatcagcctgagttcaagagcctgagactgttg
agggcagatgagttccggtacaccaatatgggtggggagactggtatcgagggcgtggac
gacaggaaggacatggaggagacacgcaggaccttttctctgttggggttaacggaggac
ttccaggctgatgtgttcaaggtgctggctgggattctacatctgggaaatgtagagatc
agaaacgttggatcggacaaatcatcagttagttccagtgatccccacatggcagccttt
tgcgaccttctcggggtcagtcctgacggtgttacccgttggctgtgccaccgccgcttc
gtcatggtaacagagactgtggtgaagccggtaaccaggaagcgggcggtgaatgccaga
gatgccctcgccaagcagatctattcgcatctgtttgactgtgtcatccataagatcaac
gcagccctgcaggtcccagggaaacagcactccttcataggagtactggatatctatggc
tttgaaacatttgacatcaacagttttgaacagttttgcatcaactatgccaatgagaaa
ctgcaacaacagttcaacttgcatgtgtttaagctggagcaggaggagtacatgaaggag
gatattccttggactctggtagacttctatgacaaccagccggtcattgacctgattgaa
gccaagatgggcatcctggacctgctggatgaagaatgcctgttcccccagggtacagat
cagaactggcttcagaagctgtataactacttggctgacaaccctctgtttgagaagccc
aggatgtctaacgaggccttcatcatacaacactttgctgacaaggtagaatatcagtgc
tggggcttcctggagaagaacagagacacactgtatgaagagctggtagacaccatgaga
accagtaagtttcctctcctggccaacttcttcctggaggaggagccaggcggcgtgggc
agtaaaggcattaaagtgaggcccgcccggcctggggtgaaaccagccaataagaatcac
aggaccaccgtgggagagaagttccgcagttctctgtacctgctgatggagactctgaat
gccaccacccctcactacgtgcgctgcatcaagcccaacgaggaaaagataccattcgag
tatgactccaagcgggtggttcagcagctgagggcgtgtggagtcctggagaccattcac
atcagcgctcagagctacccgtccaggtggacgtacatagagttctacagtcgatacagt
gtactgatgagccaacaggagctgcgcctcgacgacaagaaacacacctgcaggaccgta
ttgcagaggctgattcaggactccaaccagtacaagtttggacggaccaagatcttcttc
cgagcgggtcaggtggcgtacctggagaagctgcgattggaccgtctccgaggggcgtgt
gtgaccatccagaagcatgtgagggggtggagccacaggaggaagttcctccgtatgagg
gacgcggccatcgtcctccaacagtacgtccgcggacagagacagatacgtaaatcagtg
acggctgcagcgttgaagcaaggctgggctgctgtggtcattcagaggtactggagaggt
tatctgaccagacagatctacaggatggtccgttcctcctctatcaccatccaagccttc
actagaggctggatcgccaggaaacgctacaaaaagatggtggaagtgcagaaagcccta
atcttacagaagtatgcccgggcatggctggcgaggagacgcttccagaccctgcggcgc
ctcgtacacaacgtgcagctgtcctacaggtgccagcagctcaggaagaagctggaggat
cagggcaaagagaaccgcgggctgctggagaggctgacaagtctggccggtgttcacgcc
caaggtctagacaagctgcacagtctggaggcccagctggggaaatcggccactgagaag
gcttcgctagaggagcgagagaagaagagcaaggaggacgccaccaagacgatcgcccag
cttcaacaggaaaaagacaggttcattgtggaaaagcaggacttagaaaagaagcttgca
gactcagcaacagagatgaaagaccgctttgatcaaatcaagacaactctgaaagaagat
ctggaacgggaagaaagattgagaaagattgcagagaacaaccttgagctgcagaaggag
gaccatgagaaggaggtggaggttctgagggaggagaacaggaggctgaaggaggagaga
gtccgcctgcagagacagttagaggaggaggcgcaggtcaacactgaactacaggaccag
gtcatacagctcaccaagcacgtcaaggttatacctgagttacggaaggatcttcataac
ctccaaacccagagagatgatctggaccggagaatgaaggagcagtcagaacaagccaaa
gctaagatgagtgtgattacaagacagcttcttggtggcatggtggaagaggaggtcatt
tccaggttgacctccgacgggccagaccagatatatgaagttggggatctgttgactgct
ttcgacgggctgcagaaagctaccagagttctggagaaccgccagagggaacagaaggaa
ggttatgacagccaggtggaggggctggcgttcaaggtggaacacctgcagaaagaaaac
agtcagctgcagaaactgttccgggagaaaacgtccgtcaacgacgccattggtcaggag
gtggccaggctcaaccaggaaaacatggtcatacctgagctcaggcagcaggtgtcagag
ctacaaagacataaacaggaagtggaagtccaactggaggagcaggccagagagatgacc
gaaaaaattgaggagatttcaaaaaagcttcagatgaatgttgaagaggaaggctcccaa
cgcaggctgttgaaacagcatgaggaggtggagagggagaaggaggaggtggagaggagg
gtggaggagctggaggaggtgatcaggagacagaagaacacagagagcgaggccaagacc
agattcagtcaggaggcatcacgactcactgcagagaacatggactttgaagaacagctc
gacacgaaggatagattgataaggaagctacaaaatcaaatcaagagtcttcaaacatcc
gagaaagccaatcaaacgccagcgcccactattcccaaagaataccttggaatgttggag
tacaagagggaggatgaacccaaactcattcaatacatcattctggacctgaaacccagg
ggggtagtggtcaacatgatccccggcatggccgctcagcttctcttcatgtgtgtccgc
cacgctgactacctcaacgacggagccaagctcaagtctctcatgaacggcatcatcagc
ggggtcaagaaggtcatcacggatcaccaagcagactttgagttgctgtcgttctggctc
tccaacatgtaccacatgctcaactgcctgaaacagtacagtggggaagaggagtttatg
aaacagaacactccgcgtcagaataagaactgcttgcagaactttgacttgtctgaacac
aggcagatcttcagtgacctggccatccgtatctatcaccagtttatatctgttatggag
aaggctcttctgcccatgatcgttcctggtatgctggagcatgagagcctccagggtatc
tctagtatgaagcctaccggtttccgtaagcgttccaacagtatctacgaggaccaggag
gtctacaccatctcctctctcctccagcagctcagtctttaccacagcactatgagtcag
cacggcatggagggggtgctggtcagacaggctgtgaaacagatcttcttcctggtgggt
gcggccacactcaacaacatcctgctacgcaaagacatgtgctcctgtaggaagggcatg
cagatcaggtgtaacatcagttacctggaggagtggctgaaggagaaggacctattgcag
ggtaccagtgccatggaaactctgaagcctctgtctcaggctgcctggctgctgcaggtc
aacaagaccaccgatgacgacgccaaggaaatcatagaacaatgctctgaactcaacact
gtacagatagtcaagattctgaactcttacacgcccattgatgattttgagaaaagggtg
gcaccgtcgtttgtccgcaaagttcaggggttgctccaggaccgtgagggaggatcttcc
cagctgatgctggacacccagtatcatttccaggttaccttccccttcaccccgtcctct
caggctctggagctactccagctaccgtccagcctcagactgagcttcctcaccaggatc
taa
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