Coregonus clupeaformis (lake whitefish): 121568080
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Entry
121568080 CDS
T08357
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121568080
04121 Ubiquitin system [BR:
cclu04121
]
121568080
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
121568080
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
121568080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
Serglycin
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
121568080
NCBI-ProteinID:
XP_041734591
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All DBs
Position
6:53064275..53068144
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AA seq
693 aa
AA seq
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MEAKSASSSNLQLVAHPRAKSKVWRYFGFDTDADGCILHWRRIYCRICMTQIAYSGNTSN
LSYHLEKNHPVEFCEFVKSNTEQMREAVATAYSKIKTEPMQQQCQEAILKQSPAFENINR
RHNDLTSAVISFVCEGMYPVSVVEEPTFQALLRTADPRYLPPSKIDVAMKALPQRYNQIR
DAVLGEVAGVVNCGVSTDLWQSQTQNRTYISLSMHSLNQNGLGSGFSMSSKCLKTFEVPE
DNTAENITRALYEAFVEWGITHKVNGATTNGSLDIVKACSLLDLSVQMPCLGHTINRGMD
EAFQLPRIDSFLGRCRKLVDYFQQSVMAMYLLREKQRQQGLAQCVLIRDRVRSWGTTLTM
LQRLKEQQAVISVVLMEDSDNHQLSFKDSEWNMVEGLIGVLQPFKLVADMITDCRYPTIS
MVRPVLHMLLNTTLKAKEGDAKEVGMAKEVISKVLSSTYPQTSEIATFLNVATFLDPRYK
RLPFLSPHDRSQVESKVVEEAKAILEKQRNENVVTDELAPLSDEPPNKKQTLDKQFPSCS
NAGNPLAVIFCQSGTDENQEELHAQVVEELSNFKSQKILGLNEDPLHWWSDRMGLFPTLP
KVLQKYWCVPATSVPSHRLFSSSGTFFCGKRNRLTPAHVDQQVFLYENLRSCNEAEPIED
DSGEWGFGQEQDSGSGHGITGQSTAQYQTVTIP
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggaggccaaaagtgcttcctcatctaatctccagcttgttgcacatccaagggcaaaa
agtaaagtatggaggtatttcggctttgacaccgatgcagacgggtgtatactacactgg
aggaggatttactgtcgcatatgtatgactcaaatagcatattccggcaacacctccaat
ctctcgtaccacctggagaagaaccacccagttgagttctgtgagtttgtgaagagcaac
acggagcagatgcgtgaggcggtcgcaacggcctactccaagataaagactgaacctatg
cagcagcaatgtcaggaagccatcctgaagcagagtccagcgtttgaaaatatcaaccga
cggcataatgatctgacatctgcggtcatcagctttgtctgtgaagggatgtaccctgtg
tctgtggtggaagaacccacctttcaggcccttttaaggactgcagatccaaggtacttg
ccccctagcaaaatcgacgtggcaatgaaggccctaccacagaggtacaatcagatccga
gatgcagtgctgggtgaggtggcaggggtggtgaactgcggtgtctcaactgacctttgg
caaagccaaacccagaacaggacctacatctccctgtccatgcactccctgaaccaaaac
ggactaggttccggtttctccatgagttccaagtgcctgaaaacctttgaagttccagag
gacaatacagctgagaatattaccagagcgttgtacgaagcttttgtcgaatgggggata
actcacaaagtcaacggtgccaccactaacggttcattggacattgtcaaagcttgctct
cttctggatctatccgtgcagatgccttgccttggccacactataaatcgagggatggat
gaggcctttcagctgcccagaattgacagctttttgggacgttgccgtaaacttgttgat
tatttccaacagtctgtgatggcgatgtatctgctgcgagagaagcagaggcaacaaggc
cttgcccagtgtgtcctcatcagagacagggtccgatcctgggggaccacgctgactatg
ctccagcgcctgaaagagcagcaggccgttatcagtgtggtactcatggaggacagtgac
aaccatcagctgagtttcaaggacagtgaatggaacatggttgagggcttgattggagtt
ctgcaacctttcaaactggtagctgacatgataacagactgtaggtatccgaccattagt
atggtgaggcctgtccttcacatgctactgaacacaaccctcaaggccaaagaaggggac
gcaaaagaggtcggcatggccaaagaggtcatctccaaagtgttgtccagcacatacccg
cagacgtccgagattgcaacgtttctcaacgtcgccactttcctggatccccgttacaag
aggcttcctttcctgtccccccacgaccgctcccaagtggagagtaaagtcgttgaagag
gccaaagccattcttgagaaacagaggaatgagaatgtggttacagatgaattggctcct
ctttctgatgagccacccaacaaaaaacagactcttgacaaacagtttccttcatgtagc
aatgcaggcaaccctttggccgtgatattttgccagtcaggcactgacgagaaccaagag
gagctacatgctcaggtcgtagaagagctgagcaacttcaaatctcagaagatcctgggt
ctcaacgaagaccctctccattggtggtcggaccgcatgggcttattccctactctcccc
aaggtgctccagaagtactggtgtgtccccgccactagtgtcccctcccacagactgttc
agctcctcagggactttcttctgtggcaagaggaaccgcctcaccccggcacatgtagac
caacaggtgtttctctatgaaaacttgcggagctgcaatgaggctgaacctattgaggat
gactcaggggaatggggcttcggacaggagcaggactctgggtcaggccatggaataact
gggcagtccactgcccagtaccaaacagtcacaataccctaa
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