Coregonus clupeaformis (lake whitefish): 121568088
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Entry
121568088 CDS
T08357
Name
(RefSeq) RAD50-interacting protein 1-like
KO
K20474
RAD50-interacting protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121568088
Membrane trafficking [BR:
cclu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
121568088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
Motif
Other DBs
NCBI-GeneID:
121568088
NCBI-ProteinID:
XP_045071799
LinkDB
All DBs
Position
Unknown
AA seq
786 aa
AA seq
DB search
MAAATAEQQDGPSDESDLQSPISTNDEDSETGSGDGALPDYFVDLIEKEIGGDLKSLKKV
SALLEKLTAENKLLEEQVLTVSSSVPLRVSVALSAAEESRVSLEGLLQRERVLSNTLIQH
LQGAQPWADSLGQTLGQLDNTERHMKYLQCLSRIEELSDSIQQCLMTNSIWEAVGAVGSM
ASLDVGLKESGCSHLQAFLRETLRFWHKIIKDRLSGDFEELLTQLHWPFISPPTQSLSPP
ANAQELHSQLELLVAQLLSLQTSDDLISEEPPSVSRVGLPPTTPLSLPVQIMLLPLSKRF
RYHFTGNRQTNSLNKPEWFLTQVLMWMGNSSNFMEEKIQPILDRNGANVNAKVELCRGLL
TLAQEKLASDAPRLLYDDALFCHLVDEILQFERELRSTHSYPSTLPGALHVLLEEVVLQK
WLTVERKMAIEKVDAMLSAEGAWSSQYRDISDMDELKAPDCAETFMTLLLVITDRYRALP
CPRAQLRFLALQRELVDDFRIRLTQVMKEESRNPLGARYCAILNAANYISTVLGDWGDNV
FFLQLQQSAVVLGEEELLGPLGVTESGRLASLEGSLFEGLLGLLERLRGDMLGRLLEAVM
RDVREKAQSYCRDRWLSLPSQCDQATMSLSSSACPLMLCLRDHLLQLQRMLCQPLFQMGW
QGLSERLDLFLYQDLILYNHFNEGGAAQLQFDMTRNLFPLFGHYCKRPENFFKHVKEACV
ILSLNVGSALLLRDVLRQAEEDEEEPGTPEGQQPSPVSALNELGVYRLAPCDVLILLNLR
ASWPGQ
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccactgcagagcagcaagacggcccaagtgatgaatctgatctacaaagc
cctatatcgacaaatgatgaagactccgaaacaggatcgggggatggagcactccccgac
tactttgtcgacttgatagagaaagaaatcggaggggatctgaagtcgctgaagaaagtt
agcgcactcctggagaaactgacagcggaaaacaagttgctggaggagcaggttttgacg
gtgtccagttcggtgccgctgcgggtgtcagtagcactgtctgcagccgaggagtcccgt
gtgtctctggaaggtttgctccagcgggagagggtcctgtccaacaccctgatacagcac
ctgcagggcgcccagccctgggcagacagcctgggacagaccctgggacagctggacaac
acagagagacacatgaaatacctgcagtgtctgtcacgaattgaagaactcagtgacagc
atccagcagtgtctgatgaccaacagtatatgggaggcagtgggggcggtgggcagcatg
gccagtctagatgtgggcctaaaggagtctggctgctctcatctccaggccttcctcaga
gagacactacgcttctggcacaagatcattaaggacagactgtctggtgattttgaggag
ttgctgacccagctccactggccgttcatctctcctcccacccagtctctctccccccct
gccaacgctcaggagctccacagccagctggaactactggtggcccagctcctgtctctg
cagacctctgatgatctcatttcagaggagccgccctctgtgtcccgtgtagggttgccc
ccgacgacacccctgtctcttcccgtccagatcatgttgcttcctctgagcaagaggttt
cgataccactttactggaaaccgtcagaccaactcactcaacaagccagagtggttcctg
acccaggtcctgatgtggatggggaacagctccaacttcatggaggagaagatccagccc
attctggacagaaatggagctaacgtcaacgccaaggtggagctgtgtcgtggtctactc
accctggcccaggagaagctagcgtcggacgctcctcggctgctctacgacgacgctctc
ttctgccacctggtggatgagatcctgcagttcgagagggagctgcgcagcacccactct
taccccagcaccctgcccggagcgctgcatgtactgctggaggaggtcgtgctgcagaag
tggctcactgtggagaggaagatggcgatagagaaggtggatgccatgctgtctgctgag
ggggcgtggagctcccagtacagagacatcagtgacatggacgaactcaaggctccagac
tgcgctgagaccttcatgaccttactgttggtcatcactgaccgctaccgtgccctcccc
tgccctcgtgcccagctgcgtttcctggcgctacagagagagctggtggacgacttccgt
atccgcctcacccaggtcatgaaggaagagtctcgcaacccgctgggcgctagatactgt
gccatcctcaacgctgccaactacatctccaccgtgctgggggactggggagataatgtg
ttcttcctgcagctgcagcagtcagctgtggtcctgggggaggaggagttgttggggccg
ctgggggtgacggagtctggccgtctggcctctctggaggggtctctgtttgaggggctc
ctggggctgctggagaggctgagaggagacatgctgggcaggctactagaggctgtcatg
agggacgtacgggagaaggcccagtcctactgcagagacaggtggctgtccctgccgtcc
cagtgtgaccaggccaccatgtccctgtccagctcagcctgtcctctcatgctgtgtctc
agggaccacctgctccagctgcagcggatgctgtgtcagcctctcttccagatgggctgg
cagggcctgtctgagaggctggacctcttcctctaccaggatctgattctgtataaccac
ttcaacgaaggtggtgcggcccagcttcaatttgacatgaccagaaacctcttccctctg
ttcggacactactgcaagaggcctgagaacttcttcaaacatgtgaaggaggcctgcgtc
atcctgtctctgaacgtgggctcagctcttcttctacgagatgtcctgaggcaggctgag
gaagacgaggaggaaccagggaccccggagggccagcagcctagccctgtgtcagccctc
aacgagctgggggtctaccgcctggccccctgcgacgtcctcatcctgctcaacctcagg
gcctcctggccaggacagtga
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