KEGG   Coregonus clupeaformis (lake whitefish): 121568105
Entry
121568105         CDS       T08357                                 
Name
(RefSeq) tripartite motif-containing protein 42-like
  KO
K12018  tripartite motif-containing protein 42
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cclu01009]
    121568105
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cclu04121]
    121568105
Protein phosphatases and associated proteins [BR:cclu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     121568105
Ubiquitin system [BR:cclu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    121568105
SSDB
Motif
Pfam: zf-B_box ANCHR-like_BBOX zf-C3HC4_4 zf-RING_UBOX fn3
Other DBs
NCBI-GeneID: 121568105
NCBI-ProteinID: XP_045076873
LinkDB
Position
6:19400120..19403049
AA seq 595 aa
MPGTDSESGCWPRSRSSKNRSNPKAKHDAQTKAELDPVTRSLALHLCCPACDTLLLQPVS
LPCGHCLCQPCLEGVHKKHSSTKASDAQQPQPCSQCPRCLVHYSLQPGGAWTFPENLLLA
NVSEQLLERLEGLRRVKQPKNTRAKETALRVTACEICSKQREAQRYCRTCGLNYCAKCLR
KLHGNRAFQAHVLTEPVEGGCRDPCPTHHERSLSHCCLDDGALGCQGCMEQGHRGHDVSP
IHEAHARRELEQAGKVKSQCEADMVSMDQLRARTGSDGAELRRRVREGFLSLRNVLLDQE
AALLSHLDNLTSSTRSRARDFLQTSAPLLGSLTGLEVISEQALLEPDTVAFLTGAVALTQ
WLQRVNRDIHRPALTLQEGEPFKGVKMDFDALLRDLQGLLGTHLHWKSPEVAAVVSVVNG
VEAAVLEGCCEVVPVPSCPGTPYRTRALADSPRSPRTPRSPRKLVMEEQLCLLAGDCSDK
ERHLLPRPPIIYQHIVSGATVEIFWMLPMGEEVETFDVHFQDAVIVGMAMEEGKGVVLVG
LKTCNLQTAGLRLDTHYLFRARSVNSHGAGDWSSSYRVNTERQGDEAKAAVTQEI
NT seq 1788 nt   +upstreamnt  +downstreamnt
atgcctggtactgattctgaatctggctgttggccgcgctcgaggtcttcgaagaaccgc
tccaaccccaaagccaaacacgatgcccagaccaaagctgagctagacccggtgacccgc
tccctggctctccacctgtgctgcccagcctgtgacaccctcctcctccagcctgtgtct
ctgccctgtggccactgcctctgccagccctgcctggaaggtgtccacaagaagcactcc
agcaccaaggcctctgatgcccagcagccccagccctgctcccagtgcccccgctgcctg
gtccactactccctccagcccggcggggcctggaccttcccagagaaccttcttctggcc
aacgtatctgagcagctcctggagaggttggagggcctgaggcgggtgaagcagcccaaa
aacacccgggccaaggagacagccctgagggtgaccgcctgcgagatctgctctaagcaa
cgcgaggcccagcgctactgccgcacctgcggcctcaactactgtgccaagtgcctgaga
aaactccatggcaaccgggcattccaggcccatgtgttgacggagcccgtggagggtggg
tgccgcgatccgtgccccacccaccatgaacgctccctgtcccactgttgcctagacgac
ggagctctggggtgccaggggtgcatggaacaggggcaccggggacacgacgtgtcaccc
atccatgaggcccacgcccgcagggagctggagcaggctgggaaggtgaagtctcagtgt
gaagccgacatggtgtccatggatcagttgagggcccggacgggctctgacggcgccgag
ctgagacgccgcgtgcgcgagggcttcctgtctctccgtaatgtcctgctagaccaggag
gcggcactgctctcccacctggacaacctgacctccagcacccgcagcagagccagggac
ttcctccagacctctgccccactcctgggctccctgactgggctggaggtgatctctgag
caggccctcctggagcccgacacagtggccttcctgaccggggctgtggcgctgacccag
tggctgcagagggtcaacagggacatccaccgccctgccctgactctccaggagggggag
cccttcaagggggtgaagatggactttgatgccctccttagagacctgcagggcctgctg
gggacccacctccactggaagagcccagaagtggctgcagtggtttccgtggtgaacggc
gtggaggcagccgttttggaggggtgctgcgaggtggtgccggtgccatcctgcccaggg
accccctaccgcacccgggccctggcggactccccccggagcccccggacccccaggagc
cccaggaagctggtgatggaggaacagctgtgcctgctggctggggactgcagcgataag
gagcgccacctgctgcccaggccccccatcatctaccagcacatcgtcagtggagccact
gtggagatcttctggatgctgcccatgggcgaggaggtggagacctttgacgtccacttc
caggatgctgtgatcgtggggatggctatggaggaggggaagggagtggtcctggtgggg
ctgaagacctgcaacctgcagacggccgggctccgcctagacacacactacctgttccgg
gcacgctctgtcaacagccacggggccggggattggagctcctcctacagggtgaacacc
gagcgccagggagacgaggccaaggcagccgtgacacaggaaatctaa

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