Coregonus clupeaformis (lake whitefish): 121568120
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Entry
121568120 CDS
T08357
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121568120
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121568120
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
121568120
NCBI-ProteinID:
XP_041734640
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Position
6:26695922..26706243
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AA seq
873 aa
AA seq
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MENITPDQWQAIVNKKFNFPPELIAAIKEDNSILVESLLSTGDGIIRQLDESEDRLWREA
LNLSIRLGNEDAFSALMLGVKFDFRQIYEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDV
RSFSMAIFDHSIDDSQFAPGVTPLTLAGQKDLYEIVTMLTKKGHVIPLPHSISCTCLECR
NGRQYDLLKFSLSRINTYRGIASRAYLSITTEDAMLSAFRLSRELRKLSKKEAEFKPEYL
SLEELCQEFAVEMLAMCRNQSEVTTILNNCDDDDEDELDEQTFEEGIPTLSRLRLAVNYN
QKLFVSHPICQQVLSSIWCGNIPGWRGSKTVWKLTVSLGIFFTMPFLCMIYWVAPKSKIG
KTLKIPVIKFLLHSASYLWFIIALLAESIFMELYRDEFASRQQNILYNSLHMIWVVGFFW
SECKNVWAEGLRGYMVDWSNILDIVALSMYLASFALRVFVMATAHNVCQDKNLVEKCAYF
TQTVRDEWWQEDPQLISEILFAVTSMFSFTRLAYILPAHESLGTLQISIGIMIDDMMRFM
FILMIIGTAFLCGLNNIYVPYATSPHLGRFNETFNFLFWTMFGASNQGYTDMPDFVLAQF
VGRVLYGVFTLVIVIILLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGSTIPV
PFNLIPSPKALLYLLRGFFCCCNRKKTPDYPPIASVSNSTMNDSGEAGKDRVSFRLQVVK
ALVQRYIEAARREFGEATRKDVGNRITELNKVVGRLHSDIKQFHQNLQNSKSFGSNSNGG
NFLGKYIKGAKNNFKNFDKNEAMGNSPDPLRVAVHLMGKVAACCSPAVCARPGEPLGRHQ
PFITRSPEAQRPRARSSMGLGNDYVQGHSPPPG
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatattacgccggaccaatggcaggcgattgtgaacaaaaagtttaatttcccc
ccagagctgatagcagccattaaggaggacaactcaattctggtggaaagcctgctgtcc
acgggggacggcatcatccgccagctggatgagtctgaggaccgtctgtggagagaagcc
ctgaacctgtccatccgcctaggcaacgaggacgctttctccgctctgatgctgggcgtc
aagtttgacttcaggcagatctacgaggcgctgctggtggcggtggacaccaaccagccc
cgggtggtcaagaggctcctggaccgtctcgaccaggagaagggcaacaagatggacgtg
cgctccttctccatggccatatttgaccactccattgatgactcccagtttgcacccggc
gtgaccccgctgaccctggccggtcagaaggacctgtatgagatagtcaccatgctgact
aagaagggccatgtcattcctctccctcactctatctcctgtacctgtctggagtgcagg
aacggccgtcagtatgacctgctgaagttctctctgtctcgtatcaacacctaccggggc
atagccagccgggcgtacctctccatcaccacagaggatgccatgcttagtgccttcaga
ctcagtcgggagctacgcaagctctccaagaaagaggctgaatttaagcccgagtacctg
agcctggaagagctgtgtcaggagttcgcagtggagatgctggccatgtgtcgcaaccag
agtgaggtcacaacgatcctgaacaactgtgatgacgatgatgaagatgagctggatgag
cagaccttcgaggagggtattccaaccctgtcacgcctacgccttgcagtcaattacaat
cagaaactgtttgtgagtcatcccatctgccagcaagtgctgtcgtccatttggtgtgga
aacatcccagggtggaggggcagcaagacggtctggaaactcacggtgtctcttgggatc
ttcttcactatgcctttcctctgtatgatctactgggtcgctcccaagtccaagattgga
aagactttgaagatacctgtgatcaaattcctgctgcactctgcctcctacctgtggttc
atcatcgcccttctagctgagtctattttcatggagctgtaccgcgatgagtttgcatcc
cggcagcaaaacatcctctacaactccctccatatgatctgggtggtcggtttcttctgg
agtgagtgtaagaatgtgtgggcggagggtctgaggggttacatggtagactggtccaac
atcctggacattgtagcgctcagcatgtacctggcctcctttgctctgagagtcttcgtc
atggcaactgctcacaatgtttgccaggacaaaaacttagttgagaagtgtgcctacttc
acccaaacagtgcgggatgaatggtggcaggaggaccctcagctgatctcagagattctg
tttgctgtcaccagcatgttcagcttcacccggctggcatacatcctgcctgcccatgag
tctctggggactctgcagatctccattgggataatgatcgatgacatgatgaggttcatg
tttatcttgatgatcattggaacagcttttctctgtggactgaataatatctacgtgccc
tatgcaacttccccacatcttggacgcttcaatgaaaccttcaactttctcttctggacc
atgtttggtgcgtctaatcaaggctatacggacatgccagattttgttctggctcagttt
gtgggcagggttctgtatggggtcttcacgctcgtcatagtcattatcctgctcaatatg
ctcatcgccatgatcactaattcattccagaagatagaggatgatgctgatgttgaatgg
aagtttgctcgttcaaagctctacttgagttacttcagagagggctccactataccggta
cccttcaacctcatcccctctccaaaggccttgttatacttactgaggggctttttctgt
tgttgcaaccgaaagaaaactccagactatcctcctattgcctctgtgtccaacagtaca
atgaacgacagtggagaggcagggaaggaccgagtgtcatttcgcctgcaggtggtcaag
gcgctggtacagcgctacatagaagcagcccgcagggagtttggagaggcaacacgtaaa
gatgtggggaacaggatcacagagctgaacaaggtggtggggagacttcactctgatata
aagcagttccatcagaacctacagaacagcaagtccttcggttcgaacagcaatggaggc
aacttcctgggcaagtacatcaaaggagcaaagaacaactttaagaactttgataaaaac
gaggcaatggggaatagtccagacccgttacgagtcgctgtgcacctcatggggaaggtg
gcagcttgctgttcacctgctgtttgtgccaggcctggtgaacccctggggcgtcaccag
ccattcattaccaggagcccagaggcccagaggcccagagcacggtcctctatgggcctg
ggaaatgactatgttcaaggacactccccaccccctggatga
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