Coregonus clupeaformis (lake whitefish): 121568146
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Entry
121568146 CDS
T08357
Symbol
hnrnpul1
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like protein 1
KO
K15047
heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121568146 (hnrnpul1)
03400 DNA repair and recombination proteins [BR:
cclu03400
]
121568146 (hnrnpul1)
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
121568146 (hnrnpul1)
DNA repair and recombination proteins [BR:
cclu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121568146 (hnrnpul1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
Motif
Other DBs
NCBI-GeneID:
121568146
NCBI-ProteinID:
XP_045072636
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Position
6:31409532..31468664
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AA seq
898 aa
AA seq
DB search
MRSAEVNKLKVNELKEELRRRALDTKGLKADLVERLKAALEAAESGGAARGAPEQDHATP
EEEQGDEGFSAGLLGDEGFPNEDSLDFGAGGAAEEESRGMEREVSSDSDLGFSMPDFTAD
VPLPLPVPVHKAEETPEYHETQPALAEHEHHGQHERKREYEGKVEAEKEEEEKNEEEQPG
VGPTDMEEQKVEQEAEQTKMEEGDRQEGDRQEGDRQEGDRQEGDRQEGDRQEGDRQEGDR
QEGDRQEGDRQGRKRPYDEGRGYGYSEHREDKRSRSPQPPAEEEEEDFDDTLVALDTYNC
DLHFKVSRDGYSGYPLTLEGFAYLWAGARASYGVSKGKVCYEMKIFEEIAVKHLPSSEPD
PHVVRIGWSLDSCSTQLGEEAFSFGYGGTGKKSSDCKFEDYGEKFGENDVIGCFIDFDAS
EEEVEMAFSKNGVWLDVGFRASREELAGRPLFPHVLVKNCSIEFNFGQKEEPFHPPPEGY
SFIQTLGIEDRTRGAVGPASKAGCEILMMVGLPACGKSTWASKHAESHPEKKYNILGTNA
IMEKMKVMGLRRQKNYAGRWDVLIQQATQCLNRLIQIAARKRRNYILDQTNVYGSAQRRK
MRPFEGFQRKAIVICPTEEDFKARTLRQTDEQGKDVPDQAVLEMKANFLLPEPSDFLEEV
VFVELQRDEAYKLVKEYNEEGRKAGPPPDKRYDNRPGEFRGNGGGYQRNEDRGGPRGGGG
YQSRDAGGNRRGKEGADSSPGNNRGGYNGNRWGGNGNYREGGSAPRGGYNRNQQSGGYNR
PVPYNKGGYNQSYNPSSYNQGNYQQGYNYGSYSQYPGYSQTQSYSETTPAAAGQTYSQQQ
NYNQQYQQYAQQWQQYYQNQSQWNQYYGQYGDYAAQGQGQQGQGSQGQGGQGASGSSQ
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgaggagtgctgaagtaaataaattgaaagtgaatgagctgaaagaggagctgcgtcgg
cgagccctggacaccaaggggctgaaggctgacctggtggagcggctcaaggcggctctg
gaggctgcggagtccgggggtgctgcgaggggggcaccggagcaggaccatgcaacaccg
gaggaggagcagggagatgagggattctcagccgggttgttgggggatgaaggattcccg
aacgaagattctctagactttggtgcaggaggggccgccgaggaggagagcagggggatg
gagagagaagtgtcgtctgattctgatctgggcttcagcatgcctgacttcactgcagac
gtccctcttcctcttcctgtccctgttcacaaggcagaggagacccctgagtaccacgag
acccaaccagccctggcagagcatgagcatcatgggcagcatgagaggaagcgagagtat
gaagggaaggtggaggcggagaaagaggaggaggagaaaaacgaggaagagcagccaggg
gtggggccaactgacatggaggagcagaaggtggagcaggaggcggagcaaaccaagatg
gaggagggagaccggcaggagggagaccggcaggagggggaccggcaggagggggaccgg
caggagggggaccggcaggagggggaccggcaggagggggaccggcaggagggggaccgg
caggagggagaccggcaggagggagaccggcagggacgcaagagaccgtatgatgagggc
cggggctatggctactctgagcaccgtgaggacaagaggtcccggtcgccccagccccct
gctgaagaggaggaggaggactttgatgacactctggtggctctggacacatataactgt
gacctgcacttcaaggtgtctcgtgacggctacagtggctatcctctgaccctcgagggc
tttgcctacctctgggccggagctagagcatcctacggagtcagcaaaggaaaagtctgc
tacgagatgaagatctttgaggagatagctgtgaagcacctcccctcctctgagcctgat
ccccatgtggtccggataggatggtccctggactcctgcagcacacaactgggtgaggaa
gcgttttcgtttgggtacggaggaacaggaaagaaatcctctgactgtaagtttgaagac
tacggagagaagtttggagagaatgatgtcatcggctgtttcattgactttgacgctagc
gaagaagaggtggagatggcgttctctaagaacggggtgtggctagacgtggggttccgg
gcgtcgagggaggagctggcggggcgccccctgttcccccatgtccttgtcaagaactgt
tccatcgagtttaactttggccagaaggaggagcccttccacccccctccggaggggtac
agcttcatccaaactcttggtattgaggacaggaccaggggggctgtaggaccggcaagc
aaggctggctgtgagatcctcatgatggtgggtctgccagcctgtggcaagtccacctgg
gcctcaaaacatgccgagagtcacccagagaagaaatacaacatcctgggaactaacgct
atcatggagaagatgaaggtgatgggtctgcgtcgtcagaagaactacgctggtcgttgg
gacgttctgatccaacaggccactcagtgtctcaaccgcctcatccagatcgctgcacgc
aagagacgcaactacatcctggaccagacaaatgtatatggatcagcccagagacgaaaa
atgcgtccttttgaagggtttcagcgcaaggctattgtaatatgtcccacggaggaggac
tttaaagcgagaacgttaagacaaactgatgaacaggggaaggatgtgccagatcaggct
gtgttagaaatgaaagccaacttcttgctccctgagcccagtgacttcctggaggaggtg
gtttttgtggagctgcagcgggacgaggcttacaagctggtgaaggaatacaacgaggag
gggcgcaaggccggcccaccccccgacaaacgctatgacaaccggccgggagagttccgt
ggcaacggcggaggctaccagcgcaatgaggaccgtggcgggcctcgcggcggcggtgga
taccagagcagagacgcaggcggaaacagaaggggtaaggaaggagcagactcctcccca
ggcaacaaccgtggcggctacaacggcaaccgctggggtgggaacggtaactaccgtgag
ggggggtcggcccctaggggagggtacaaccgcaaccaacagtcaggaggctacaaccgc
ccggtgccctacaacaaggggggatacaaccagagctacaaccccagcagctataatcaa
ggcaactaccaacagggttacaactacggcagctacagtcagtacccaggatacagccaa
actcagagttacagcgagactacaccagccgctgcaggacagacctacagccaacagcag
aactacaaccagcagtaccagcagtatgcccagcagtggcagcagtactaccagaaccag
tctcagtggaaccagtactacggacagtatggggactatgccgcccaggggcagggtcaa
caaggtcagggttcacaggggcagggaggtcagggggcatcaggttcctcccagtaa
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