Coregonus clupeaformis (lake whitefish): 121568154
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Entry
121568154 CDS
T08357
Name
(RefSeq) F-box only protein 40-like
KO
K10315
F-box protein 40
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121568154
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121568154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box-like
F-box
PD40
Motif
Other DBs
NCBI-GeneID:
121568154
NCBI-ProteinID:
XP_041734669
LinkDB
All DBs
Position
6:complement(28815076..28834364)
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AA seq
685 aa
AA seq
DB search
MPPAGLHHHCERCSSLHCQAPVNTSVSCVVIKCHLHCGAAFHMCKEKEHQLLCPNEMVPC
LNVDYGCPFTLLRHRLAKHLEVCPASTVICSQQWIRFPVPDTAIYRTGLADPDHQKQLNV
SMALRDQELLFRCLKMKTVFPELMEKVEEEPAQKEIDVGVTSSAGEGRSSLDPGEAIEDG
DNGYGYGDGMELEKELSQEEREALSNNKDMKRRQQTVNNMEKKMNLGEEEKARSSSNGLR
KVEGDGSSKKCQENGATASVVDVTRSGLAPWQDGVVERLRREVTIADFNMYLLHHGAMLI
NFGQLDACTPREKDFVYGNLEPVAVQTVRTFNVPTSYRPKRIHMNNPWSPMVNKSVDTAD
LGVSVEDLPKCDEVNATLLCFLEKELKGHNISEGGGADGLYVDVGTQTYNFPSAPFKPEA
SLADIITDQHKGLYVQIQTEDITRRHNSTNSAFSYLCGHVFRRDEYHTHLKNVHLDIQSC
LNGWFEQRCPLAYLGCNYSQRRFHPAGQKAMVTYRQDLSTFSLKPEGSSTLSDSGKTITI
TSDRKRPRNLDPLSRLPFEILQHVAGFLDSFTLSQLSQVSQLMREVCVTLLEERGMVYLK
WEKKTYSHGGTSWKCRKKVWEFSSLFSKVDSWCFDDDVASMSEHLKVCPFYQREELSKPV
KLASMEGARERPQRQSLLDLPLADP
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgcccccagcaggtctgcatcatcactgtgagaggtgctccagcctccactgccaagcc
cccgtgaacacctctgtctcctgtgtggtcattaagtgtcatctacattgtggtgctgcc
ttccatatgtgtaaggagaaggagcaccagttactgtgtcccaatgagatggtcccctgc
ctcaacgttgactacggctgtcccttcaccctgctccgccacaggctagccaagcacctg
gaggtctgccccgccagtactgttatctgctctcagcaatggatccgcttcccagtgcca
gacacggccatctacaggaccggcctggctgacccagatcatcagaagcagctgaacgtg
tctatggccctgagagaccaggagctcctcttcagatgcctcaagatgaagaccgtcttc
cctgagctgatggagaaggtggaagaagaacctgctcagaaagagatagatgtaggtgtc
accagctctgcaggtgaaggtcgtagttcattagaccctggtgaagcaattgaggatgga
gataatggttatggttatggagatgggatggagctggagaaggagctgagtcaggaggag
agggaggccttgtccaataacaaggacatgaagagacgtcaacaaaccgtgaacaacatg
gaaaagaagatgaatcttggtgaagaagagaaagcacgcagctcatcaaatggtcttcga
aaggtggagggggatggatcatccaagaagtgccaggagaatggagccaccgcaagtgtt
gtagatgtcactaggtctggccttgcaccgtggcaggacggcgtcgtggagagactgcgt
agagaggtcaccattgcagatttcaacatgtatctgttgcaccatggagccatgctgatc
aacttcggtcaacttgatgcctgtactccgagggagaaggactttgtttacggaaacctg
gagcccgtagcagttcaaactgtgcgcacgttcaatgttcccacgagctaccgtccgaaa
cggattcacatgaacaacccctggtcaccgatggtcaacaaaagcgttgatacagctgat
ctaggggtttcggtagaagatcttccaaagtgtgatgaagtcaatgcaactttgttgtgc
ttcttggagaaagagctaaagggccacaacatctcagagggtggaggagcagacggcctc
tatgtagacgtcggaacacagacttacaactttccctctgctccgttcaaacctgaagcc
tcgctggcggacatcatcacagaccaacacaaaggcctctatgtccagatccaaactgag
gacatcaccagaagacacaactctaccaactctgcctttagttacctctgtggccacgtc
ttccgccgcgacgagtaccacactcacttaaagaacgtgcacttggacatccagtcctgc
ctgaacggctggttcgagcagcgctgcccactagcatacctgggctgcaactacagccag
aggaggttccatcctgcaggtcagaaagccatggtcacctaccgccaggatctcagcacc
ttcagcctcaaaccagagggctcctcgacactgtccgactctggaaagaccatcaccatc
acctcagacaggaaacgtcctcgtaacctggacccgttgagcagacttccctttgagatc
ctccagcatgtggcagggttcctggacagctttaccctgtctcagctgtcccaggtgtcc
cagttgatgagggaggtgtgtgtcacactgctagaggagagggggatggtctatctgaaa
tgggagaagaagacctactcacatggaggaacatcatggaaatgcagaaaaaaggtgtgg
gagtttagcagtctgttttccaaggtggacagttggtgctttgacgacgatgtcgcctcc
atgtctgagcacctgaaggtctgccctttctaccagagagaggagctcagtaagcctgta
aagctagccagtatggagggggccagagagagaccccagcgccagagtctactggaccta
cctctagcagacccataa
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