Coregonus clupeaformis (lake whitefish): 121568165
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Entry
121568165 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: vitronectin-like
KO
K06251
vitronectin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510
Focal adhesion
cclu04512
ECM-receptor interaction
cclu04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121568165
04518 Integrin signaling
121568165
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121568165
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121568165
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121568165
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121568165
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121568165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hemopexin
Somatomedin_B
Motif
Other DBs
NCBI-GeneID:
121568165
NCBI-ProteinID:
XP_045072772
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Position
6:complement(38472066..38489198)
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AA seq
685 aa
AA seq
DB search
MRLGLILLLAGLATVFAAEESCMDRCENGFDSKKNCQCDTMCRYYKSCCSDYETACRMKT
RGDTFEFAEDDYGPVAPTTPVSPTKPEDQLLMGPTQPQSQSQLEAQLEAAKATKAALATH
AGRGSDRGPQRGQVPVEVPLPETAKATDAPSVPQALSIQQKISVSQKATVTEPVTTEAPV
TTAEVDTTTEEVKTTTEEVETTTEEVVTATKAPVVEPNAESCSGRPWDSLMQLKNGSVYA
FRVEWFFELDEXSVMPGYPKLIQDIWGIRGPIDAAFTRINCQGKTYPHKGNKYWRFDDGV
LEEDYPRDINVGFEKIPDGVNAAFAIAAPGHHAKEKVYFFKGDQYYQYEFKHQPSHEECI
KTSAGSPSALFTAYTDIYHNNWEELFNMLFRGIPNHHGGHRFINKDWIGIKAPVDAVMTG
RLYITPRPLAAPLSPPLPPLRDRNDGRRQPWDQQWGQYRKQYGQQDQQNGQQYGQQYLHL
HLRHLADALIQSDLQIGACKASHYGQQGQQNGQQWDQQWGRRRNRHQSYWGAGTEMAMGQ
AFAEKWMDMEKGFAEREMDLGRNLAETGMAIEGMFGGWDMRRTDARDEDRDRDRRRDDQD
RRRDEQDRRRDGYNYNSRFNADESAYWEFVNKGQPVQSVYFFKGDKYYRVDLKTKKVDPA
SPPYPRSIGKYWLGCPEKHLGAEKK
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgaggctcgggttgatactcctgctagccgggctagctactgtgtttgctgcagaggag
tcatgcatggaccgctgtgagaatggcttcgactccaagaagaattgccagtgtgacacc
atgtgtcggtactacaagagctgctgctcagactatgagaccgcctgtcgtatgaaaaca
cgtggggacacctttgaatttgcagaggatgattatggtccagttgcccctacaacgccc
gtctccccgaccaaacctgaagaccagctcctcatggggccaacacaaccccagtcacag
agccagctagaggcgcagctcgaggcagctaaagccaccaaagcagcattagccacacat
gcaggtagaggctcagatagaggcccacagagaggccaggtcccagtggaagtcccactc
ccggagacagctaaagccacagacgcaccatcagtcccacaggcactctcaatccaacag
aaaatctcagtctcccagaaagcaacagtaacagaaccagtcacaacagaagctccagtc
acaacagcggaagtggatacaaccacagaggaagtgaagacaaccacagaggaagtggag
acaaccacagaggaagtggtgacggccaccaaggctccggtagtagaaccaaatgctgag
tcatgcagcggcaggccctgggactccctcatgcagctcaagaatggctctgtctacgcc
ttcagagtggagtggttctttgagctggatgagtagtcggtgatgcccggctaccccaaa
ctgatccaggacatctggggtatcagaggacctatagatgctgccttcacacgtatcaac
tgccagggcaagacatacccacataaggggaacaagtactggcggtttgatgatggtgtg
ctggaggaggactatcccagggatatcaatgtgggctttgagaagataccagacggcgtg
aacgcagccttcgccatagcagcccctggacaccacgccaaagagaaggtctacttcttc
aaaggtgaccagtactaccagtatgagttcaagcaccagccatcacatgaggagtgtatc
aagacatcagctgggtctccctctgctctgttcacagcctacactgacatctaccacaac
aactgggaggaactcttcaacatgctcttcagaggcatccccaaccaccatggtgggcat
cggttcatcaacaaggactggatcggcatcaaggccccagtggacgctgttatgacaggc
agactctacatcacccccaggccactggccgcacccctgtccccacctttacccccttta
cgggaccgcaacgacgggaggcgccagccatgggaccaacagtgggggcagtatcgcaaa
cagtatggccaacaggatcagcaaaatggacagcaatatggacaacaatatttacattta
catttacgtcatttagcagacgctcttatccagagcgacttacaaattggtgcatgcaaa
gctagccactatggacaacaagggcaacaaaatggacagcagtgggaccagcagtggggc
cgacgcagaaatagacaccagtcttactggggtgccgggacggaaatggctatggggcag
gcgttcgcagagaagtggatggatatggagaaaggattcgctgagagggagatggatctc
ggtcggaatctggcggagacggggatggctatagaggggatgtttggagggtgggacatg
cgccggacggatgctagggacgaagacagagacagagatagaaggagggatgaccaggat
aggaggagggacgaacaggacaggagaagagatggatacaactataactccagattcaac
gctgacgaaagtgcctactgggagtttgtcaacaaaggccaaccagtgcagagcgtctac
ttcttcaagggagataaatactacagagtggatctgaagaccaagaaagtggacccagcc
agccctccttaccccaggtccatcggcaagtactggctgggctgccctgaaaaacacctg
ggggcagagaagaaatag
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