Coregonus clupeaformis (lake whitefish): 121568221
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Entry
121568221 CDS
T08357
Name
(RefSeq) eukaryotic translation initiation factor 2A-like
KO
K15026
translation initiation factor 2A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121568221
03012 Translation factors [BR:
cclu03012
]
121568221
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
121568221
Translation factors [BR:
cclu03012
]
Eukaryotic type
Initiation factors
eIF-2A
121568221
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
eIF2A
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Motif
Other DBs
NCBI-GeneID:
121568221
NCBI-ProteinID:
XP_041734709
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Position
6:11153156..11159931
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AA seq
589 aa
AA seq
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MATPTPLLAVRGSDGTVLLRGPPNCEKNADFQRDPRQSRYVAFSKDGTLFAWCNGEKVTV
VKVADGSQVRSFDLPKTAMLEFSPLNTVLATWQVYSKTQENPQGDANLQLWDLQTGTCLK
ALYQKKVQGWCPSWSDDEKIAVRSVNNELHFFENNDFNAIANKLHLQKVSEFVLSPGSQP
SKVAVYVPGSKGAPSFVRLYQYPNFGGATCALANKSFFKADRVTMLWNKKATAVLVQASV
EVDKTGASYYGEQTLHYLATNGETSAVQLQKNGPIYDVAWSPSATEFCVVYGFMPAKATV
YNLKCDPVFDFGTGPRNAVYYSPQGHVLVLAGFGNLRGQMEVWDVKKWKQVSKPQAPDST
HFAWCPDGEHIVTSTCAPRLRVSNGYKIWHYTGTVLYKQDTPTGTELWETVWQPFPDGTF
PERPVKYQAAPSELGSTETKPAQAYRPPALRNKPVTASSKLHEEEPPQNMRPGATGDKQL
SKTALKNQKKREAKKAAKQEINPDALEPQSDPSPASSTQPEPSCGDPELDKKIKNVKKKL
KAIDELKALQATGKPIQKNQLEKMEKESQLMKELEDLQLVKENTEFVHE
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcccacacctctcttagcagtccggggatctgacgggacagtgctgctccgt
ggaccaccaaactgcgagaagaatgccgattttcaaagggaccctcggcaaagtagatat
gtggctttcagcaaggatgggacattgtttgcatggtgcaatggagagaaggtcactgtt
gtgaaggttgcagatggctcacaagtcaggtcctttgaccttccaaagactgcaatgttg
gagttctctccgctgaacactgtgctggctacatggcaggtgtatagcaagacacaggaa
aacccacagggagatgccaacttgcagctgtgggatttgcaaactgggacctgcctcaag
gctctctaccagaagaaggtacagggatggtgtccaagctggtcagatgacgagaagatt
gcggtcaggagtgttaacaatgaacttcacttttttgagaacaacgattttaacgccatt
gccaataagcttcacttgcagaaggtgtccgagtttgtgctgtccccgggaagtcagcct
agtaaagtggctgtttatgtccctgggagcaaaggtgccccctcatttgtccggctatac
caataccccaactttggtggagcgacctgcgctctggccaacaagagtttcttcaaggct
gacagggtgaccatgctgtggaacaaaaaagccactgcggttctggtgcaggccagcgta
gaggtggataaaacaggggcctcatactacggagaacagactttacactacttggccacc
aatggggagacttctgccgtgcagctacagaagaacgggcccatctacgacgtggcatgg
agcccaagcgccaccgagttctgcgtggtctatggcttcatgcccgccaaggctactgtc
tacaacctcaagtgcgaccccgtcttcgacttcggcacgggcccccgcaacgccgtctac
tacagcccccagggccacgtcctggtcttggccggcttcgggaacctgcggggccagatg
gaggtgtgggatgtcaagaagtggaagcaggtgtccaagccccaggcgcccgactccacc
cacttcgcctggtgcccggacggtgaacacattgtcacatcgacctgtgccccccggcta
cgtgtcagcaacggctacaagatctggcactacaccggcacggttctgtacaagcaggac
acgccgacgggcacagagctctgggagactgtgtggcagcccttcccagacgggacgttc
cctgagaggccggtgaagtaccaggcagcacccagcgagctgggcagcacagagaccaag
ccggcccaggcctaccgcccacctgccctgcggaataaaccggtcacagccagctccaaa
ctgcatgaagaggagccgccacagaacatgaggcctggcgccaccggggacaagcagctg
tccaagacggctctgaagaaccagaaaaaacgagaggcaaagaaagcagccaaacaggag
ataaacccagatgcccttgagccccagtcagacccctctccagccagcagcactcagcct
gaaccctcctgtggcgacccagaacttgacaagaagatcaagaacgtaaagaagaaactg
aaagctatcgacgagctgaaagcgctgcaagcaactgggaaacccattcaaaagaaccag
cttgaaaagatggaaaaggagtctcaactcatgaaagagcttgaggatcttcaactagta
aaagaaaatactgaatttgttcatgaataa
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