Coregonus clupeaformis (lake whitefish): 121568259
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Entry
121568259 CDS
T08357
Name
(RefSeq) 5'-3' exonuclease PLD3-like
KO
K16860
phospholipase D3/4 [EC:
3.1.4.4
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00564
Glycerophospholipid metabolism
cclu00565
Ether lipid metabolism
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
121568259
00565 Ether lipid metabolism
121568259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121568259
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
121568259
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
121568259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc_3
PLDc_2
PLDc
Motif
Other DBs
NCBI-GeneID:
121568259
NCBI-ProteinID:
XP_041734749
LinkDB
All DBs
Position
6:complement(44917056..44925445)
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AA seq
485 aa
AA seq
DB search
MISDIPYEKMCDVESRREESRRKAQMYYRCLLGLTGVATLLLAALFLQTLLLPVVNSSPN
KPGFKLPLPLTDTCTDPCKIVLLESIPEGLEFNSSVTNPSIYQAWLNLISEARSSVDIAS
FYWTLTNKDTGSHEPTANQGEDVLNRLAQVSGKLSVRIAVNTPTKSQPQEDINLLKSSGA
DVRAVNMRDLTTGVLHTKFWVVDNKHIYIGSANMDWRSLTQVKELGAVVYNCSCLAADLG
KIFEAYWYLGQKDTPIPSPWPSSFNTPYNKDTPLQLPLNGTASSVYLSSSPPSFCAAGRT
GDLQSILSVMEDAREFVYIAVMNYLPTMEFSQPKRYWAEIDTQIRRVAYEKRVKVRLLIS
CWASSSPVMIPFLKALDSMQEPKAKLDVQVKLFVVPANPKQKEIPFARVNHNKYMVTDKV
AYIGTSNWSGDYFVNTAGSALVVNQTAAQSAEPTVQAQLQAVFERDWDSAYSTPILQHTD
LKMVC
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgatttctgatattccctacgagaagatgtgtgatgtggagtcgaggagagaagagtcc
cgcaggaaagcacagatgtattataggtgtctgctgggtctcactggggtggccaccctg
ctattggctgccctgttcctccaaaccctgctgcttcccgtggttaactcctccccaaac
aagcccggcttcaagctcccacttcctctcactgacacctgcaccgacccctgcaaaatc
gttctattggagagcatcccagaggggttagagttcaactctagtgtcaccaacccatcc
atctaccaggcttggctgaacctgattagtgaggctcgcagtagcgtggacatcgcgtct
ttctattggacgctcaccaacaaagacacaggctctcacgagccaacagcgaatcagggt
gaggatgtcctgaataggctagctcaggtgtcgggaaagctctctgtccgcatcgctgta
aatacaccaacaaagtcccaacctcaggaagacatcaatctcttgaaaagttctggtgct
gatgtaagagccgtgaacatgcgggatttgaccactggagtacttcacaccaagttctgg
gtggtggacaacaagcacatctatattggcagtgccaacatggactggaggtcccttacc
caggtgaaggagctgggggctgtggtgtacaactgcagctgcttggctgcagacctgggg
aagatcttcgaggcctactggtatcttgggcaaaaagacacacccatcccgtccccttgg
cccagcagtttcaacactccttacaataaggacacgcccctgcagctgccacttaatggc
acagcctccagcgtgtatctgtcgagctctccaccatctttctgtgctgccgggaggacc
ggagacctgcagtctattctcagtgtgatggaggacgcacgggagtttgtctacatcgct
gtcatgaactatctgcccaccatggagttttcacaacccaaaaggtactgggcagaaatt
gacactcagatcagacgcgtggcatacgagaagcgggtgaaggtgcgcctgctcatcagc
tgttgggcgagctcttcgcctgtcatgatccccttcctgaaagccttggattcaatgcag
gaacccaaggccaagctggatgtccaggtgaaactctttgttgtgccagccaatcccaag
cagaaagaaatcccctttgccagagtcaaccataacaagtacatggtgacagacaaggtt
gcctacataggtacctctaactggtctggagactattttgtgaacactgctggatcggct
ttggtggtgaaccaaacggctgcccagtcagcggagcctacggtccaggcacaactacag
gccgtgttcgaaagggactgggactccgcctacagcaccccaatcctccagcacaccgac
ctcaaaatggtgtgttag
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