Coregonus clupeaformis (lake whitefish): 121568391
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Entry
121568391 CDS
T08357
Name
(RefSeq) RNA polymerase II-associated factor 1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121568391
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
121568391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
121568391
NCBI-ProteinID:
XP_041734867
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All DBs
Position
6:21823536..21829119
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AA seq
537 aa
AA seq
DB search
MAPTIQTQAQRDSDGHRSSSHRTVPERSGVVCRVKYCNSLPDIPFDPKFITYPFDQHRFV
QYKATSLEKQHKHELLTEPDLGVTIDLINPDTYRVDPSILLDPADEKLLEEDITAPSSSK
RSQQHAKVVPWMRKTEYISTEFNRYGVSNEKVEVKIGVSVKQQFTEEEIYKDRDSQIAAI
EKTFEDAQKPIAQHYSKPRVTPVEVMPVFPDFKMWINPCAQVIFDSDPAPKDMSAPQGVE
MMSQAMIRGMMDEEGNQFVAYFLPNEETIRKRKRDVDEELDYMPDDLYDYKIAREYNWNV
KNKASKGYEENYFFIFRDGDGVYYNELETRVRLSKRRAKAGAQSTTNAVLVCKHRDMNEK
ELEAQDARKAQLENHEPEDEEEDMDLGKLQDSGDEKEKGSESEGDNSDSDSDREDEDGKR
SGAEDDEVEGAKRRRKASGSGSESGEEEVKLADEVEIFGSDDDSDDDDNEPKNGAAQSSG
EEGSGSEEEKESHRERSRSGSASPAHSSGSDHSEGGRAQSGSGSEQASDSSDGSDSE
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggctccaactatccagacacaagcccagcgagactcagacggtcacaggagttcatca
cacagaactgttccagagaggtccggagtggtctgtcgggtaaagtactgcaacagcctg
cctgacatcccatttgatcccaaattcatcacatatccatttgaccagcacaggtttgtg
cagtacaaggcaacgtcgttagagaaacaacacaaacatgagctgcttactgagcctgac
cttggcgtcaccatcgacctcattaacccagacacctaccgcgtcgaccccagcattctt
ctggatccagctgatgagaagttattggaagaagacatcacggctccatccagctcgaaa
agatctcagcagcacgccaaggtggtcccatggatgaggaagactgagtacatctctaca
gagttcaacagatatggagtctccaatgagaaagtggaagtcaagatcggtgtgtctgtc
aaacagcagttcacagaggaggagatatacaaggatagggacagccagattgctgctatt
gaaaagacctttgaggatgcacagaaaccgattgcccagcactacagtaaacccagagtc
actcctgtggaggtgatgcctgtgttccctgacttcaagatgtggatcaacccgtgtgct
caggtaatcttcgactctgatcctgctcctaaagacatgtcagcaccccagggtgtggag
atgatgtcacaggccatgattagaggtatgatggatgaggaaggaaaccagtttgtggcc
tacttcctgcccaatgaggaaacgattcgcaagcgcaagagagatgtggatgaggagctg
gactacatgcctgatgatctgtatgactataagatagccagggagtacaactggaacgtg
aagaacaaagccagcaagggctacgaggagaactacttctttatcttcagagacggagat
ggagtctactacaacgagctggagaccagagtgcggctgagtaagaggagagctaaggct
ggagcccagtctactacaaatgctgtgctggtgtgtaagcacagagacatgaatgagaag
gagctggaagcacaggatgcgcgtaaggctcagctggagaaccatgaaccagaggatgaa
gaagaggacatggacttgggtaaactgcaggactctggtgatgagaaggagaaaggcagc
gagagcgaaggagacaactctgacagtgactctgacagggaggatgaggatggaaagcgg
agtggagctgaggatgatgaagtggagggagcgaagcggaggaggaaggccagtggtagc
ggcagtgagagtggcgaggaggaggtcaagctggcggatgaggtggagatcttcggtagc
gacgatgacagtgatgacgatgacaacgagcccaagaatggagcagcccagagcagcggg
gaggagggcagtgggagcgaggaggagaaggagagccatagggagaggagtaggagtggc
agcgcgtctccggcccacagtagcggtagtgaccactcagagggcggccgcgcccagagc
gggagtggcagtgagcaggcctcagactccagcgacggcagtgacagtgaataa
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