Coregonus clupeaformis (lake whitefish): 121568475
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Entry
121568475 CDS
T08357
Name
(RefSeq) extracellular calcium-sensing receptor
KO
K04613
vomeronasal 2 receptor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121568475
G protein-coupled receptors [BR:
cclu04030
]
Others
Chemoreception
Vomeronasal pheromone
121568475
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_3
ANF_receptor
NCD3G
Peripla_BP_6
Ephrin_rec_like
Motif
Other DBs
NCBI-GeneID:
121568475
NCBI-ProteinID:
XP_041734939
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Position
6:complement(35046430..35063687)
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AA seq
923 aa
AA seq
DB search
MCGLQRVILGSLPLLCIHTAFACELLGRFDMPSLFKAGDVMIGGIFPVFNKQENSNTSFV
KEPAEVKCAGFDLRAFRWTQVMMFAIDEINKDSSLLPNVSLGYRILDSCASPTNTLRAAL
TLVSMPEEIEPTAPCLPPISALIAESGSSQSLALAGTLGPFRVPMVSYFSTCACLSDKAK
YPTFFRTIPSDYHQAKALAALVKHFGWTWIGAIQSDNDYGRNGVLAFTEEVQKLGVCIAF
VGTVLRTYPSSRILDVVDMIKQSTVKVILSFVPEGDLYPLMREVVRQNITHIQWIASEAW
ITAARPSTPEIYSSFGGTIGFGVRKMAIPKLRHFLMGISPYTDPKAAFVRDFWEKIVGCQ
PLSTGEPSGSERGSNMCTGAETLVDSQDLFFNVTQLRVSYNVYKAVYAVAHAINRLIFCK
KEGESQMRPCVNLSQIQPTEVSDHLKTVHFINQFGEAVFFDANGDPPAAYDIINWQLRAG
QVQHVTVGQFGLAANKAYELSIQEDNIVWRTGKSIPVAVCSQICPVGTRKAQIKGKPVCC
FDCIPCADGTIANTTGAADCSPCPQEYWSNDGRDQCILKTVEFLSYHEPMGIALTMVSLL
GACLSFATVLVFITYKDTPVVKASNSELSSLLLFSLFLCFLCPLTFIGRPTAWTCMLRHT
AFGVTFALCISCMLGKTIVVVTAFRSTLPSNNNIMNWLGPKQQRVIIFCCTQGHVLICAA
WLIAAPPLPFRNTQDQCSKIILECSVGSQLAFWCVLGYIGLLACLCFILAFLARKPPGNF
NEAKFISFSMLIFCAVWISFIPAYVSSPGKYTVAVEIFAILASSFGLLFCLFAPKCYIIL
LKPEKNTKQHLMGNKKHFEVKWRIARLAAESGGPTYAGKRIGIYPDLSAELLKQQTKPEM
RLYPPGKTYIDLPEHNTHVFHCQ
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggactacagagggtcatactcggctcattgccattgctctgcatccacacagcg
tttgcctgtgaactattgggccggtttgacatgcctagtttgttcaaggcaggggatgtc
atgatagggggcattttccctgtattcaacaaacaagagaacagcaatacctcttttgtg
aaggagcctgctgaagtgaagtgtgctggatttgacttgcgggcctttcgctggacccaa
gtgatgatgtttgcgattgatgaaataaacaaagacagtagtctactgcccaacgtatcc
ctaggctacaggatccttgattcgtgtgcatctcccaccaatactttacgggctgctctg
acgttggttagcatgccagaggagatagagcctactgccccatgccttcctcctatatct
gcccttatagctgaatcaggctcctctcagtccctggctttggctggaacactgggacca
ttcagagtgccaatggtcagttacttctctacatgtgcatgtctgagtgataaagctaaa
taccccacattcttccgcaccatccccagtgactaccaccaggctaaggctttagcagcc
ctggtcaagcacttcggctggacttggattggggcaatacagtccgataatgactatggc
cggaatggggtcctagccttcactgaagaggtacaaaaacttggggtttgcattgcgttc
gttgggacagtgttacgaacctacccaagcagtagaatccttgatgtggtggacatgatc
aaacaatcaacagtcaaagtcatcctgtcatttgttcccgagggggatctttacccgctg
atgagggaggtggtgagacagaatataacgcacattcagtggatcgccagcgaggcctgg
atcactgcagcccggccctccaccccagaaatatacagctccttcggtgggaccatagga
tttggggtgcggaagatggccatcccaaaactacggcactttctcatgggcatcagtccc
tacacagatccaaaggctgcctttgtgagggatttctgggagaagatagtaggttgtcag
cctctctcaaccggtgagccctcaggctctgagaggggcagtaatatgtgtactggagcg
gagacacttgtggactcacaggatctgttcttcaatgtcacacagctgagagtgtcttat
aacgtgtataaggcagtgtatgctgttgcacacgccattaatcgcttaatattttgcaaa
aaagaaggggaaagccagatgagaccgtgtgtgaatctatcacagatacagcctactgag
gtcagtgatcatctgaagactgtgcatttcataaatcaatttggtgaggctgtgttcttt
gacgcaaatggagacccccctgccgcatatgacatcatcaactggcagctgagggcaggt
caggtgcagcatgtgactgtgggccagtttggcttagctgctaacaaggcctacgaactc
agcatccaggaagataacatagtttggaggacagggaaatcgattcctgtagcagtgtgc
tctcaaatctgtcctgttggaaccagaaaagcccaaatcaaaggaaaacctgtctgctgt
tttgactgcatcccctgtgctgatgggacaatagccaacacaacaggagcagcagactgc
agcccctgtccacaggagtactggtccaacgacgggagggaccaatgcatcctgaaaaca
gtcgagttcctgtcttaccacgaaccaatggggatcgcccttaccatggtgtccctgctc
ggagcctgcctgtcatttgccaccgtgctggtgttcatcacctataaggacacaccagtg
gtcaaagccagtaactctgagctgagctctctactgctgttctctctcttcctgtgcttc
ctctgtcccctcaccttcatcggcaggcccaccgcctggacctgcatgctgcgccacacc
gccttcggggtgacctttgccctctgcatctcctgcatgctgggcaagactattgtggtg
gtaacagccttcaggtctaccctgcccagcaacaacaacatcatgaattggctggggccc
aaacagcagagggtcatcatcttctgctgcactcagggacatgtgctgatctgtgctgcc
tggctcattgctgcccctcccttgccctttagaaacacccaggaccaatgctctaagatc
attctggagtgcagtgtgggctcccaactggcattctggtgcgttctgggatacatcggc
ctcttggcctgtctatgcttcatcctggcctttctggcccgaaaaccaccgggcaacttc
aacgaggccaagttcatatccttcagcatgctgatcttctgtgccgtgtggatctccttc
atcccagcctacgtcagctctcctgggaagtacactgtagctgtggagatattcgccatc
ttagcttccagctttgggctgctgttctgtctgttcgctccaaagtgttacatcatcctc
ctgaagccagagaagaacactaaacaacatctcatggggaataaaaagcactttgaagtc
aagtggcgaattgctcgccttgcagcggaatccgggggtccgacctatgcagggaagagg
atcggcatctacccagacctgagtgccgaactgctaaaacagcaaactaagcctgagatg
cggctttatccacccggcaaaacgtatattgaccttccagaacacaacacacacgttttc
cactgccaatga
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