Coregonus clupeaformis (lake whitefish): 121568648
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Entry
121568648 CDS
T08357
Name
(RefSeq) prominin-1-A isoform X1
KO
K06532
prominin 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121568648
04090 CD molecules [BR:
cclu04090
]
121568648
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121568648
CD molecules [BR:
cclu04090
]
Proteins
121568648
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Prominin
DUF2207_C
Baculo_PEP_C
DUF948
Kre9_KNH1_C
Motif
Other DBs
NCBI-GeneID:
121568648
NCBI-ProteinID:
XP_041734991
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Position
1:40723498..40757189
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AA seq
828 aa
AA seq
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MGACRSVWRLGGCAWVVLAWIGALLLGSSLALPPPATCPKRVSPLNLIQTQYRSIPGADT
GFMSGVVQSFLHTVQPNPFPKDLLVKLVEEKGNIYDRKIITEVLLYEVGFLVCAVIGIVY
IILMPLVGFCLACCRCCGHCGGHMYQEQTKAVHCHRRGLYWATLLTTLVILAGNICMFFS
NQLLKVSVKDSSVELSNTLDNLQTYLTAVPQQIDSVLMESNKTVDEVTRNLNDMGPLLGR
EIQRRLEGPLNPALKSVRDMAKVMNRTSVLLVGLNSTLTQLQSDVTVVQANVTSVRDRIN
STLRNPDCAGCSAYQSELQKLTFDTTITIPSLNELQLAVNFITKADLNSKGEDFFASIPQ
RVTNDTRDIVQNVKQQLDDIKRQISLVKGDIPVSSLSMISDTLGEAQRYIDMYSPEAEKV
EMISWGVGIILSCVVLLVVVCNLLGLFLGPVGLSPQADPKERSGTADCGGTFLMAGAGLS
FLFSWLFMLVVLLLFIVGGNVYTLVCQPWRSGQLLQFVDTPGMIPGFDLREILGLKSNLT
LTEVYNECEQNRPLWTTLHLYELIDLNSLLNVSKYKEEIQQHFDSNEIKLPTITLLTPEM
CKKINSFSDMAHDVDLSSITQQINSISSINLTETAGMLDQLATVQIDTGIQSQLTQEAGG
LRGIQSDIVRIIIPQLTQLNSTIGALSVIVSEINGTVGEVLNKVGTAQDFLNTNTTQIVK
AESRKFLDCQMGYFMAYADWANLTITQQIGLCGPVAKAVDSAEVIVCSNMMESLNAFCFS
LGWCMIFLVPSIIFSIKLAKFYRRMKHSDVYENHIAMNIRDRARVKPY
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgggagcatgtaggagtgtttggaggttggggggctgcgcctgggtggtgttggcctgg
atcggggctctgttgctggggtccagcttggccctgcctccccctgccacctgtcctaag
agagtctctcccttgaacctgatccagacccagtaccggtcaatcccaggagcagacaca
ggcttcatgtccggggtcgtccagtccttcctccacaccgtccagcccaaccccttcccc
aaagatctgctggttaaattagtggaggaaaagggcaatatatatgacaggaagatcatc
acagaggtccttctctatgaagttggtttcctagtgtgtgctgttatagggattgtgtac
attatcctgatgcccctggtggggttctgcctggcctgctgtcgctgctgtggacactgt
ggaggacacatgtaccaggaacagactaaagctgtccactgtcacaggagaggattatac
tgggctacactactcacaacactagtcatacttgcaggaaacatctgcatgttcttcagt
aaccagttactgaaagtgagtgtcaaggacagctctgtagaactcagcaatacactggac
aacctccaaacctacctcaccgctgtcccacagcaaattgacagtgtgctgatggagagc
aataagacagtggatgaggttaccagaaacctcaatgacatgggtcctctgctgggcaga
gagatccagagacgtctagagggccccctgaatcctgccctgaagtctgtcagagatatg
gccaaagtgatgaaccgtaccagtgtactgctggtggggttgaactctactctaacccag
ctccagtctgatgtgactgtggtccaggctaatgttacctctgtcagagaccgcatcaac
agcacattgagaaaccctgactgtgctgggtgttctgcctatcagtcagagctacagaaa
ctaacatttgacacaactatcactatccccagtctgaatgagctgcagttggctgttaat
ttcatcacaaaggctgatctcaactcgaagggagaagacttctttgccagtattccccag
agagtgaccaacgacaccagggacattgtacagaatgtgaagcaacagcttgacgacatc
aagagacagatctctttggtgaagggagacatccctgtctcttccctcagcatgatctca
gacacactgggagaggctcagagatacatcgacatgtactcacccgaggcagagaaggta
gagatgatcagttggggtgtgggtattatcctgagctgtgtagttctcctggtcgtagtg
tgtaacctcctgggtctgtttttgggtccggtgggactgagccctcaagccgacccgaaa
gaacgatccggcaccgccgactgtggaggaaccttcctaatggcgggtgcagggctaagt
ttcctgttttcctggctcttcatgctggtggtgttactactgtttatagtgggagggaat
gtctacacactggtctgccagccctggcgcagtggacagctactacagtttgttgacact
ccgggcatgatacctggcttcgatttaagagagatactgggcctgaagagcaacctgact
cttactgaagtatacaatgaatgtgaacagaacaggcctctatggacaaccctccacctg
tatgagctcatagacctcaatagtctactcaacgtgtccaaatacaaagaagagattcag
caacactttgacagtaatgagatcaaactgcctaccatcaccctgctcacccctgagatg
tgcaaaaagataaacagcttctctgacatggcccatgatgttgacttaagctctatcaca
cagcagatcaacagtatttccagcattaatctgacagaaacagcaggcatgttagaccaa
cttgctactgttcaaattgatacaggtatccaatcacagctgacacaggaggctggaggc
ctgagagggatccagtcagacattgtcagaatcatcatcccacaactgactcagttgaac
tccaccataggtgcccttagtgtcatagtatcagagatcaatggcacagtaggagaggtg
ttaaataaagtgggaacagctcaagacttcctcaacaccaacactacacagatagtcaag
gcagagagtaggaagttcctagactgtcagatggggtacttcatggcatatgctgactgg
gctaacctcacaatcactcaacagattggtctctgtggcccagtggcaaaagctgtggac
tcagctgaggttatagtctgctcaaatatgatggagtctctgaatgcgttctgcttcagt
ctgggctggtgtatgatcttcctggtccccagcatcatcttctccatcaaactggccaag
ttctacaggaggatgaagcacagcgatgtctacgaaaaccacatagccatgaacatccga
gaccgagcccgagtcaaaccctactga
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