Coregonus clupeaformis (lake whitefish): 121568704
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Entry
121568704 CDS
T08357
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 36 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121568704
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121568704
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121568704
Peptidases and inhibitors [BR:
cclu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121568704
Ubiquitin system [BR:
cclu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121568704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
121568704
NCBI-ProteinID:
XP_041735036
LinkDB
All DBs
Position
Unknown
AA seq
1179 aa
AA seq
DB search
MPIVDKLKEALKPGRKDSSAGDEGDLNKLLASSAKKVLLQKIEFEPASKGFSYQLDSLKT
KYVILNPRSSEGAASGQRASTEPAQIKRQVSDNQGGGQSDGIPAPQKMLFPGNRLSMRWE
RVYRVGAGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHSRACHQSGFCMICVMQNHII
QAFANTGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLNGYPKLDRTT
QATTLVHQIFGGYLRSRVKCSICKSVSDTYDPYLDIAVEIRQAANIVRALELFVKPDVLS
GENAYMCGKCKKKVPATKRFTVHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYM
SQSTGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSMVHSSNIKVVLNQQA
YVLFYLRIPETKKNVDGQITKQGMGKNVATSEQFRKTNLNRPLSSPQVTKVWDRLAERSI
IRTFESNTKLDPFQLRKIQSVDGGLGIPVSRNGSQQPNRMSNGTSSAAHAPPRLAGGPTL
IEEPFKKLKKPCPPQQPQARSSTPAPSSNGVGSRSDGGDRRHGNQGGRGLAASTSLKSLS
DSSSADTSDSKDSMGTKSAPVGGTSTPPRNGMASPAKSFEPVGTEEQKTVKLKPHALINI
TSSPTSTTSPPPAKKLALSAKKASRSRSPSSTEAQHPHLPRHPSSDRTHPAQLNTLTSTS
PTHSHRVGPFHSPKLQSPPAAHHVHSGIPSKNQSPQKLNSTLSPQTNGLQPHLPKSPKPD
KTLSSSLSEPGPSSAATTLKKKKKTKKRRHSELEGGEREPALASVVPDIPAEPEPIEPAS
ERKRRKRRKKRKREEVDGDTSENHRERVQSHLEAPPPAQEEDWCQGGSWNLSPPDKGALE
QPKQPHPQPEPQPESKLQLVPMEHQCDANQGEQSMHTLTMMKRRRKRKRRRFEEGPEEAT
STHSVSERSSGMQDTVVENGAGDSTAPKKLKKKRRLKEEVKQWEESRRCCADDQRSDTEP
VEPLLKKATVENTAGVIVWDSQVKDGYKRSKAPAAEAVEDGPGDVPRPAPMAWDGKRSGG
VVEELLKNSLDKAYGTQVLSWEGEASAISRDAIDDTRDARTDTVIDEWDEDFDSGKVKKM
KKYKREKRRSGNIFQKIQDRRSMWSVTPGAKKTGFGYRH
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgcctatagtggacaagctcaaggaggccctgaagcccggccggaaggactcctcggcg
ggcgacgagggcgacctcaacaagctgctggcctcctcggccaagaaggtcctgctgcag
aaaattgagtttgagccggccagcaaaggcttctcctaccagctggacagcctcaagacc
aagtatgtgatcctcaacccccgcagcagtgagggggccgcatcggggcagagggccagc
acagagcccgctcagatcaagaggcaagtttcagacaaccaaggtgggggccagagtgat
gggatccctgccccgcagaagatgctcttccctgggaacagactctcaatgcgttgggag
cgtgtctaccgggtgggagctggcctccacaaccttggcaacacctgcttcctcaactcc
actgtgcagtgtctcacctacacaccgcccctggcaaactatctactctccaaggagcac
agtcgtgcctgtcaccagtcgggtttctgtatgatttgtgtaatgcagaaccacatcatc
caagcctttgccaacacgggcaatgccatcaagcctgtctccttcatccgagacctaaaa
aaaattgccaggcactttcggttcggaagccaggaagacgcccatgaatttttacgctac
accatcgatgccatgcagaaagcctgtctgaacggctaccccaagttagaccggacgaca
caggccaccacattggtccaccagatctttggaggttacctcaggtcgcgagttaagtgt
tccatttgcaaaagtgtgtcggacacgtacgacccttacttggacattgctgtggagatt
cgacaagcagcaaacatcgtccgagccctggagctctttgtcaagcccgacgtgttgagt
ggagagaacgcctacatgtgtggcaagtgtaagaagaaagttccggcaacaaagcgattc
acagtccatcgaacgtccaatgttctgaccctgtctctcaagaggtttgccaacttcagt
ggaggaaaaatcaccaaggacgttggctacccagagttcctgaacatccgcccctacatg
tctcagagcacgggggacccggtcatgtacggcctctatgctgtcctggtgcattctggg
tacagctgtcacgctggccactactactgctatgtcaaggccagcaacgggcaatggtac
cagatgaatgactcgatggtccattccagtaacatcaaagtagtcctcaatcagcaagcc
tatgtcctattctacctgaggatcccagagaccaagaagaacgtggacggccagatcacc
aagcagggaatggggaagaacgtagcgacgtcagaacagttcaggaaaaccaacctcaac
aggcccctctcctctccgcaggtcaccaaggtatgggacaggctggcagaacggtccatc
atcagaacgtttgaaagcaatacgaaactggaccctttccagctgcgtaagatccagtct
gtggatggcggcctgggcatacccgtgtctaggaatggctcccagcagcccaacaggatg
tccaacgggacgtcgtccgctgcccacgccccccccaggctagcaggcggacccacgctg
atcgaggagcccttcaagaagctgaagaagccctgtccccctcagcagccccaggcgcgc
agcagcacccctgccccctcctccaacggcgtgggcagcaggtcggacggaggagacagg
aggcacgggaaccaagggggcaggggcctggccgcatctacctcactcaagtccctgtcg
gactcctcctcggcagacacctccgactcaaaggattccatgggtaccaaaagtgcaccg
gtcggtgggacgtccaccccccctaggaacggcatggcctcccccgccaagagttttgag
cccgtgggcacagaggagcagaagacggtcaagctaaaaccccacgccctcatcaacatc
acgtcttcacccaccagcaccacgtctcccccacccgccaaaaaactggccctctcggcc
aagaaggccagtcgcagccggagtccgagcagcactgaggctcaacacccccacctgcca
cgccatccatccagtgaccgcacgcatcctgctcaacttaacaccctcacctccacctca
cccactcacagtcacagggttggtccgttccattcacccaaactgcaatctcctcctgca
gcccaccatgtccactcaggcatcccatctaagaatcagagtccacagaaactaaactcc
accctctctccacaaaccaatgggcttcagccccaccttccaaagagccccaaacctgac
aagaccctcagctccagtctgtcagagcctggcccaagcagcgccgccaccaccttaaag
aaaaagaagaagacaaagaaacggcgtcattctgaactggaaggcggagagcgagagcca
gcactggcctccgttgtcccagacatccccgctgagcccgagccgatcgaaccggccagc
gagaggaagaggaggaaaaggagaaagaagaggaagagggaggaggtggatggagataca
tcagagaaccacagggaaagggtccaatctcatctggaggctcctccgccggcccaagag
gaggactggtgtcaggggggatcatggaacctcagcccccctgacaaaggagccctggaa
caaccaaagcaaccccatccccagcctgaaccccagccagagagtaagctccagttggtt
ccaatggagcaccagtgtgatgcgaatcaaggagagcagagtatgcacactctgacgatg
atgaagaggaggaggaagaggaaaaggaggagatttgaggagggaccggaggaagcaaca
tcaacacattctgtttcagaaagaagttctgggatgcaggacacggttgttgaaaacggt
gctggggattctactgcgccaaagaagttaaagaagaagcgcaggctaaaagaagaggtg
aaacagtgggaggaaagcagacgttgttgcgctgacgaccagaggagcgacacggaacca
gtggagccccttcttaagaaggccaccgtggaaaacactgctggagtgatcgtgtgggac
agccaggttaaggatggctacaagcgctccaaggccccagcagcagaagcagtagaggat
gggcctggggatgtgccccgcccagcccccatggcctgggacggcaagaggagtggggga
gtggtggaggagctcctgaagaactctttggacaaagcctacggaacccaagtcctcagc
tgggagggagaggcgtctgccatcagtagggatgccattgatgacacccgtgatgccaga
acagacaccgtgatcgacgagtgggacgaggactttgacagtggaaaggtgaaaaaaatg
aaaaagtataagcgagagaagaggaggagcggcaatatcttccagaagatccaggaccgg
cgtagcatgtggtcggtcacacccggtgctaagaagaccggctttggataccgtcactga
DBGET
integrated database retrieval system
