Coregonus clupeaformis (lake whitefish): 121568713
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Entry
121568713 CDS
T08357
Name
(RefSeq) transmembrane channel-like protein 6 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121568713
03037 Cilium and associated proteins [BR:
cclu03037
]
121568713
Transporters [BR:
cclu02000
]
Other transporters
Pores ion channels [TC:
1
]
121568713
Cilium and associated proteins [BR:
cclu03037
]
Other cilia and associated proteins
Stereociliary proteins
121568713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
121568713
NCBI-ProteinID:
XP_041735045
LinkDB
All DBs
Position
7:60932..83530
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AA seq
819 aa
AA seq
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MAYSVDFNLSPIMEHELESLRGDDTAQDSMCQLIRVTAAGLESGNGSPENLEMEGRDRLA
YQMSDVKERADENRLQSSEESMQTNLLVRNRWSTTTLRVLSSMPSRSVGQQSRLEIISQC
NIRSTQLRRYHRQTQDISLSSRPSIRGYGIEADSEDVCEEETKRQELVNNLQSLSAGDRV
RMLRAMPLSLAEKTQLRKLAFSDKVGQSLLSSQVPCSSLLKRALYHVLFSGLFILSSLQL
WKVALKRLGGRFGTGVLSYFLFLRTLLLFNVFLFLINGLFLVLPQAIHPPLHTPSSHRVT
GLELFTGTGYLSNSLMFYGYYTNSTINISCRPDEATTGTVCGTTSDPQMMAYNIPLAYLF
TIGISFFITGIVLVYSTSKSFGRSFRVFKSQGNLAIKVFCSWDFKVSKKTSVRLQSENIS
TQLKELFSEVNCREEEKGRLAGMAVHLLAWSMCLGSTFCCVLGIHCFAKYMHLYDQRRLE
DAKGEVSLVDEARLLALPGVVSCGNLLLPGLFNLVSWMENYNSPIIRLYVAIFRNLLLKV
SILGVLCYHWLGKIAAEPERRGLQCWESFVGQELYRFLLMDFIFTVLYTVFGEFIWKLFS
QGVLRRRRKPVFDIARNVLELIYGQTLTWLGMLFTPLLPAVQIIKLLLLFHMKKRSLLVN
CQVSRKPWRASQMSTLFISLLCFPSFLGAAVSVTYTIWTIKPSSGCGPFRNLPFMFHSGK
QWAQELKSTNPKLAWLNWVHSCLVENPLFLFLVAGVFLMVIYVHTQVLDGQRKIINLLQE
QMENEGKDKKFLITRLQAVHEEKHLLSPSSRPPPQGSEV
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggcatacagtgtggacttcaatctgagccctataatggagcatgaattagagagtctt
aggggtgatgatacggcccaggactccatgtgccagctcatcagggtgactgcagcaggt
ctggagagtggtaatggcagtcctgaaaacctggaaatggaaggcagagatcggctggcc
taccagatgagtgatgtcaaagagcgggcagatgagaacaggctgcagagcagtgaggag
tccatgcagaccaaccttctggtcaggaaccgctggtctaccaccaccctgagggtgctg
tcctccatgcccagtcgcagtgtcgggcagcagagtcgtcttgaaatcatctcccagtgc
aacatccgttctactcagctgcgcaggtaccaccgccagacccaagacatttccctctcc
tccagacctagtatccgtggctatgggatcgaggcagactctgaggatgtctgtgaggaa
gagaccaagagacaggagctggtcaacaatcttcagagtctgtcggccggtgaccgtgtg
cgtatgctgcgtgccatgcccctcagtctggcagagaagactcaactcaggaaacttgca
ttcagtgacaaagttggacagtccctcttgagcagccaggttccctgcagtagcctcctt
aagcgagctttgtatcacgtcttgttcagcggtctcttcatcctaagttccctgcagttg
tggaaggtggctctgaagaggctgggtggccgcttcggcactggtgtgctctcctacttc
ctcttcctcaggactcttctgctcttcaacgtcttcctcttcctcatcaacggcctgttc
ctggtcctcccccaggccatccacccgccccttcacacccccagctcccacagagtcaca
ggcctggagctgttcactggcacgggttatctctcgaactctctaatgttttatggctac
tacaccaactccaccatcaacatcagttgtagacctgatgaagccaccaccgggactgtc
tgcggcaccaccagtgaccctcagatgatggcctacaacattcccttagcctacttgttc
accatcggcatatcattctttatcaccggcatcgtcctcgtctacagcacgtccaagtcc
tttgggaggagtttccgtgtgttcaagtctcagggaaacttggccataaaggtcttctgc
tcctgggatttcaaagtcagcaagaagacatctgtcaggctgcagtcggaaaacatcagc
acccagctcaaggagctgttctcggaggtgaactgcagagaggaggagaagggcaggctg
gctgggatggcggtgcacctgctagcatggagcatgtgtctggggagcacgttctgctgt
gtcctcggcatccactgctttgccaagtacatgcacctgtatgaccagaggagacttgag
gatgcaaagggagaggtcagtttggtggatgaggctcgtctgctggccctgcctggggtt
gtgtcctgtgggaacctgctcctccctggtctcttcaacctcgtgtcttggatggagaac
tacaactcgcccattatacgtctctatgttgccatcttcaggaacttactgctgaaggtg
agcattcttggagtactgtgctaccattggctgggtaaaattgcagctgaaccagagcga
cgtggtctgcagtgctgggagagctttgttggtcaggagctgtatcgattcctgctcatg
gatttcatattcacggttctctacacggtcttcggagaatttatttggaagctgttttct
caaggagtgctgaggagaaggaggaagccagtgtttgatatcgcccgtaacgtactcgag
ctcatctatggacaaaccctcacctggctaggcatgctcttcacccctttactcccagct
gtgcagatcatcaagctgttgttgttgttccatatgaaaaagagaagtctactggtgaac
tgccaggtatccaggaagccgtggagggccagtcagatgagcacactcttcatctctctg
ctgtgtttcccctccttcctcggggccgccgtgtctgtgacctacaccatatggacgatt
aaaccgtcctctggctgtggtcctttcaggaacctccccttcatgttccactcaggcaaa
cagtgggcccaggagctgaagagtactaaccccaagctggcctggctcaactgggtacac
agctgcttggtggagaaccccctcttcctgttcctggtggcaggtgtctttctaatggtc
atttacgttcacacccaagttttagacggccaaaggaaaataatcaatctgctacaggag
caaatggaaaatgagggtaaggacaagaagttcttgattactagactgcaggccgtccat
gaggagaagcatctactgtccccttcctccaggcctccgccacagggcagtgaggtttaa
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