Coregonus clupeaformis (lake whitefish): 121568760
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Entry
121568760 CDS
T08357
Name
(RefSeq) mitochondrial Rho GTPase 1-A isoform X1
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121568760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121568760
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
cclu04031
]
121568760
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
121568760
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
121568760
GTP-binding proteins [BR:
cclu04031
]
Small (monomeric) G-proteins
Rho Family
Miro
121568760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
SRPRB
EF-hand_6
Arf
EF-hand_7
EF-hand_1
RsgA_GTPase
MMR_HSR1
AAA
ABC_tran
AAA_14
AAA_22
Pox_A32
EF-hand_8
AAA_25
ORC-CDC6-like
AAA_5
Motif
Other DBs
NCBI-GeneID:
121568760
NCBI-ProteinID:
XP_041735100
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Position
7:complement(4988447..5014547)
Genome browser
AA seq
704 aa
AA seq
DB search
MRKDVRILLVGEPKVGKTSLIMSLVSEEFPDDVPLRAEEITIPADVTPERVPTHIVDYSE
AEQSDEQLYQEISKANVICIVYSVNNKKSIEKVTSHWIPLINDRTDKDSRVPLILVGNKS
DLVEHSSMETILPIMNQYSDIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKE
MKLSCIKALTRIFKVSDLDNDGILNDKELNFFQRTCFNMPLAPQALEDVKNVVRKNMTDG
VEDNGLTLKGFLFLHTLFIQRGRHETTWTVLRRFGYDDDLELHQEYLFPLLKIPADCTTE
LNHNAYLFLQSVFDKHDKDRDCALSPDEVKDLFKVFPYMPWGPDVNNTVCTNDQGWITYQ
GYLSQWTLTTYLDVQRCLEYLGYLGYSIICEQESQAAAITVTRNKRIDLQKKQTQRSVFR
CNILGARGSGKTSFLQAFLGRNLLKQRKIREDHKSFYSINTTYVYGQEKYLLLHEVMPDF
DFLSEEDLACDVVCLVYDVNNPRSFEYCAKVYKQYFMDSKTPCMMIASKSDLHEARQHYS
LTPLDFCRKHKLHPPQPWTCNTVDAPNKDLYTKLTTMAMYPHAKLRCMCTCNRCTFCICQ
NILRSQLLRTIKAKFYSVVLNRLHDVGAYLLDDEECSLIQQVHAISNVEESIYMESSVQP
NGPQARHMAQADLKSSTFWLRASVGATVFAVLGFAMYRAILKHR
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaggacgtgaggatattactcgtcggggaacccaaagtggggaagacgtctctg
atcatgtcactggtcagcgaggagttccctgacgacgttccccttcgagcggaggagatc
accatcccagcagatgtaacgccagagagagtccccacacacatagtggactactcagaa
gcagaacagtcagacgagcagttgtatcaagaaatatcaaaggcaaatgttatttgcata
gtttactcagtcaacaacaagaagtccattgagaaggtgacaagccattggatacccctc
ataaatgacaggacggacaaggatagcagggtaccactgatcctggtggggaataagtca
gatctggtagaacacagcagcatggagaccatcctgcctatcatgaaccagtactctgac
atcgagacctgcgtggagtgctctgccaaaaacctgaagaacatctcagagctgttctac
tatgcccagaaggcagtgctccaccctacaggacccctgtactgcccagaggagaaggag
atgaagctgtcttgcatcaaggctctaactcgcatcttcaaagtgtcggacctggacaac
gatggcatcctcaacgacaaagaactcaacttcttccagaggacgtgtttcaacatgccc
ctggcgccccaggccttagaggatgtcaagaacgtggtgaggaagaacatgacggacgga
gtcgaggacaacggactcacgctcaaaggcttcttgttcctgcacacacttttcatccag
agggggcgtcacgagaccacctggacggtgctgcggagattcggttacgacgacgacttg
gagcttcaccaggaatacctgttccccctgctaaaaataccggctgactgcaccaccgag
ctcaaccacaacgcgtacctcttcctccagagtgtcttcgacaagcacgacaaagacaga
gactgtgccttgtctccagatgaggtaaaggacctgttcaaagtgtttccctacatgccc
tggggtcccgacgtcaacaacacagtgtgtaccaacgaccagggttggatcacctaccag
ggatacctgtcacagtggacgttaacgacgtacctggatgtgcagcgctgcttggagtac
ctgggctaccttggctactcaatcatctgtgagcaggagtcccaggcagcagccatcaca
gtgacccgaaacaagcgcatcgacctgcagaagaagcagacgcagcgcagcgtgttccgc
tgcaacattctgggagccagggggagtggcaagaccagcttcctgcaggccttcctgggt
cgcaacctgctgaaacagaggaagatcagagaagaccataaatcattctactccatcaac
accacgtatgtctacggccaggaaaagtacttactgcttcatgaggtgatgccagacttt
gacttcctctcagaggaagacctggcgtgtgacgtggtctgcctggtgtatgacgtcaac
aacccacgctcctttgagtactgcgccaaggtctacaagcaatacttcatggacagcaag
acgccgtgcatgatgatcgcctccaagtcggacctgcacgaggcgcgccagcactacagc
ctgaccccgctggacttctgccgcaagcacaagctgcacccgccccaaccctggacctgc
aacacggtggacgcccccaacaaagacctctacaccaaactcaccaccatggccatgtac
ccccacgccaagctccgctgcatgtgtacctgcaacaggtgcaccttctgcatctgtcag
aacatcctccggtcccagctactgagaactataaaggccaaattctacagtgttgttctg
aacaggttacatgatgtgggagcctatctgttggatgacgaggagtgcagtctgatccag
caggttcacgccatcagtaatgtagaggagtctatctacatggagtcttctgtccagccc
aatgggcctcaggccaggcacatggctcaggcagacctgaagagctctacgttttggcta
agggcaagcgtgggggccaccgtgtttgcagtcctgggcttcgccatgtacagagctatc
ctcaaacatcgatga
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