Coregonus clupeaformis (lake whitefish): 121568769
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Entry
121568769 CDS
T08357
Name
(RefSeq) F-box/WD repeat-containing protein 9 isoform X1
KO
K10265
F-box and WD-40 domain protein 9
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121568769
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121568769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_TEP1_C
WDR55
Beta-prop_EML_2
EIF3I
NBCH_WD40
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_LRRK2
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_SCAP
WD40_like
WD40_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_IP5PC_F
Frtz
Motif
Other DBs
NCBI-GeneID:
121568769
NCBI-ProteinID:
XP_041735119
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All DBs
Position
7:5175623..5187858
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AA seq
635 aa
AA seq
DB search
MSEPRVTVGQDEAGAGREEKEAESAPLNQPSNEASRPGQLRLPSGSRLPSAEPSPSPSAE
GSGLLSLPWEMVARIASHLPAQCVITVLPQVCHALGNVGKDSTAWQLRACRLTGPRASFP
VGPRDGFDWPSACLEMEELITCWTGQGERAAREAEQAEREREVERAQERERDREALAEEG
IGEWEEVEEGRPQVDEGIEVEEVGFRVEGVMAVPWDGEELMEEGEMQQDGGGDLPMGVGE
GEERQEAAAEAMMEEERDDEQGVLEAIEVEERDDEQGVLEAIEVEERDDEQGVLEAIEVE
ERVGVLADRDGQDYIAGPKLGGEGERNGSSCPPSPPPALERLSLPSGHIAEVNSVLLVGG
EGAVCASGSRDRNVNLWDLREGGSTGRLLHTLGGQGLFSTHKGWVWCLAARGPLLASGSF
DSTVRLWDLGAQGAERGLIRARAAVLCLALPQTDVLLAGTYDKKVSVYDTRVAEPLVKSL
RLHSNAVLCLVADEQYILSGSKDCTVVIYDRRAGKTLQKLQLGSYLLSMCYSGSEVWAGD
NRGMLHAFSMQAGSIKPLSQFDVGHTSLVTGIHRSPGSLYTCSADRTIKVHLPCAPPRTL
CTLHHQAGVNGLSVEAGVLAIASGEMCVEVWRARR
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagcctcgggtcactgtggggcaagatgaggcaggggccgggagagaggagaaa
gaagctgaatctgcaccactgaatcagccctccaatgaagcctccaggcctggacagcta
aggctgccctcaggctctcggctcccctctgctgaaccgagcccttccccgtctgctgaa
ggaagcggcttgctgtcgttgccgtgggagatggtggctcgcatcgcctcgcacctccca
gcacagtgtgtcatcacggtcctgccacaggtgtgtcacgccctgggaaatgtgggtaag
gacagcacggcatggcagttgcgggcatgcaggctaaccggtcccagagcctccttcccc
gtggggccacgggacggctttgactggccctcggcctgcctggagatggaggagctgatc
acttgctggacgggccagggggagagggccgccagggaggccgagcaggcagagagggag
agagaggtggagagggcccaggagagggaaagggatagagaggccctggcagaggaaggg
attggagagtgggaggaggtggaagagggcaggccccaagtggatgaggggatagaggta
gaggaggtaggttttcgggtggagggagtgatggcagtaccgtgggatggggaggagttg
atggaggagggagagatgcagcaagatgggggaggggatctaccgatgggagttggggag
ggagaggagaggcaggaggctgcagccgaggccatgatggaggaggagagagatgatgaa
caaggggtcctggaggccatcgaggtggaggagagagatgatgaacaaggggtcctggag
gccatcgaggtggaggagagagatgatgaacaaggggtcctggaggccatcgaggtggag
gagagagtgggagttttggcggatagagacggtcaagattacatagcgggcccgaaactg
ggaggagagggagagagaaacgggtccagctgccctcccagtcctcccccagccctggag
cgcctctccctcccctcagggcacattgctgaggtcaactcggttctcttggtgggggga
gagggggcagtgtgtgcctcaggctcccgggacaggaacgtgaacctgtgggacctacgg
gaggggggctccacgggcaggctgctccatacactggggggccagggcctcttcagcacc
cacaaaggctgggtgtggtgcctggcggcccggggacccctgctggcctcgggctccttc
gacagcacagtgaggctatgggacctgggggcccaaggggctgagaggggcctaatcagg
gcccgggctgccgtgctctgcctggccctcccccagacggacgtgctgctggccggcacc
tatgacaagaaggtcagcgtctacgacaccagagtggcggagccccttgtgaagagcctg
cgtctccatagcaacgcggtgctgtgcctggtagcagacgagcagtacatcctatctggg
agtaaagactgcactgtggtcatctacgaccgaagagcagggaaaaccctgcagaaacta
cagctgggctcctacctgctgtcaatgtgctacagtggcagtgaggtgtgggcgggggac
aaccggggcatgctccatgccttctccatgcaggccggttccatcaagcccctctcccag
ttcgacgtgggacacacctcgctggtcaccggcatccacaggtcccctgggagcctctac
acctgctccgctgaccgcaccatcaaggtgcacctcccctgtgcccctccaaggacgctg
tgcacactgcaccaccaagcaggcgtcaatgggttgagtgtggaggcaggagtgctggct
atcgcctcaggagaaatgtgtgtggaggtgtggagggccaggaggtga
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