Coregonus clupeaformis (lake whitefish): 121568778
Help
Entry
121568778 CDS
T08357
Name
(RefSeq) SUN domain-containing protein 1 isoform X1
KO
K19347
SUN domain-containing protein 1/2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121568778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121568778
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
121568778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sad1_UNC
DUF4428
Motif
Other DBs
NCBI-GeneID:
121568778
NCBI-ProteinID:
XP_041735133
LinkDB
All DBs
Position
7:complement(5651367..5705355)
Genome browser
AA seq
1117 aa
AA seq
DB search
MQGKESDRRMTMDFSRLHTYTPPQCAPENTGYTYSLSSSYSTVALEFEKAHQIAPVFNSP
RMSRRSLRLQTTGGLYGNDSLADFSSQNHSSGGSSQRESWMVRSRKQQQSASSSQSLSQS
LNQSLSLSLNQTPRKTLSFSTTNTPTTGCTTASDASLVSSILDHSNLRQRSTTTSTTTTT
DGYRDQDTNLKGRSSRTDYSSTGANGGVNTVSHSHAMVANGYICKDCSIHSERKEALTTY
SSSSSSTSQAGSAAAAAAALSSSSSSTQAASTAAAAAAVSSSSASSSSASSSSLYCTDKS
QRNKTGLLVSVSNTCVHHSRRALAPIVSLVTLLFQSVLWLGTRARSHSGKGVLASLLDRA
RRAVSSSASCVSWFFKQTTLHRMMGYRANSYEGKAHSSYCGSMNVKDHVTGDGHFLNGSL
CDDCKGKQHLETHTLVHSHTQTSRTHRLLGALWTLIAYTGYCLLQPGYYVVRAGRALGSA
VGSAVQSVAQRLLSVLWLVLASPGKAARGLLWCLGTGWYQLVSLMSLFNVFFLTRCLPRM
WKLLLFLLPILLLLWFWFWGPSSFLCYLPAINLTEWRSRVVSPFTLSSSTLVPTPTTPLE
QTPPSPPGPQAQSLPYLPLQPVLPPIVTVDTESLERLERVEHGLALLWERVQRGDQRQEQ
RHGDTLAQYTLLREQLDSQTDRDSLGLWVSGLLEHRITLLRGELEQQEASHRAQTDEQRV
QQQQSQETRLAELEVLLQVLASKTEAVQQKRQPEKETTRPASVPVPVSVRVDQEAHDALL
AEVQRLEAELGRIRGDLQGVMGCQGKCEQLDTIQETVSTQVSAQVRQELRALFYGSDDQA
HQGEPDIPEGLLQWLSSRYVSGADLQALLASLELSILRNVSLQLEQSRAEAHTEAEARAA
VITTQTQSITQSVQHTAVGEGLSEEQVQLIVQNALKLYSQDRTGLVDYALESGGGSILST
RCSETYETKTALMSLFSVPLWYFSQSPRVAIQPDVYPGNCWAFKGSHGYLVIRLSLRILP
TAFCLEHIPKALSPTSNIASAPRNFTVYGLDDEYQEEGKLLGQYTYQENGDSMQKFPVME
KNDRAFQIIEVRVLTNWGHPEYTCLYRFRVHGEPRIQ
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgcaggggaaggagtctgatcggagaatgaccatggatttttctcgcctacacacatac
acccctccacagtgtgctccagagaacacaggatatacctactccctcagctccagctac
tcgactgtggccctagagtttgagaaggcgcatcagatcgctcccgtgttcaactcgccc
aggatgtcgcggcggagcctgcgtctgcagaccacgggcggtctctatggcaacgacagc
ctggctgacttctcctcccagaaccacagcagcggagggtccagtcagagagagtcatgg
atggtgaggagcagaaaacagcagcagtctgcctccagctcccagtccctgtctcagtcc
ctgaaccagtccctgtccctgtctctgaaccagacgccacgcaagaccctctccttctcc
accaccaacactcccactacaggctgcaccactgccagcgatgcctccctggtctcctcc
atcctggaccattccaacctccgccagcggtccaccactacttccaccactactaccaca
gacggctacagggatcaggataccaatctgaaagggaggagttcaaggacagactacagc
tcaacgggtgcgaacggcggcgtcaacactgtgtcgcacagccacgccatggtcgccaac
ggttacatctgtaaagactgttccatacactctgagaggaaagaagccctcaccacatac
tcttcctcctcctcttccacgtctcaggctggctctgctgcagcagctgccgccgccctc
tcctcctcctcttcgtcaactcaggctgcctctactgcagcagctgctgccgccgtctcc
tcatcatcagcatcatcatcatcagcctcatcctccagtttatactgcacggacaagagt
cagaggaacaagacaggtctcctggtgtcagtgtctaacacgtgtgtccaccacagcaga
cgagccctggcccctatagtgtccctggtgacactgctcttccagagcgttctatggctg
ggcactagggccaggagccactcaggcaaaggtgttctggcgtccctcttagacagggcc
agacgggctgtttcctccagcgcgtcctgcgtctcttggttctttaagcagaccactctc
cacaggatgatgggctacagggccaacagctacgaaggcaaagctcactccagttactgt
gggagcatgaatgtaaaagaccacgtgacgggagacggacactttttgaatggctcgttg
tgtgacgactgtaaagggaagcagcacctggagacccacacactggtccacagtcacaca
cagacctccaggactcaccgtctactgggggctctgtggacccttatagcttacacaggg
tactgtctgctccagccaggttactatgtagtgagggcaggccgggctctggggtcagca
gtggggtcagcagtacagtcagtggctcagagactcctgtcagtgctgtggctagtcctg
gcatctccaggtaaagcagccagagggctgttgtggtgtctggggacaggctggtaccag
ctggtgtctctcatgtctctgttcaacgtattcttcctgacccggtgcctgcccagaatg
tggaagcttcttctcttcctccttcccatcctgctactcctgtggttttggttctggggt
ccgtccagtttcctctgctaccttccagccataaacctgacagagtggcgctccagagtg
gtgtcccccttcaccctctcatcatctaccctggtccccacccccaccacacccctggag
cagacccccccatcaccccccggcccacaggcacagtctctcccctatctccccctacag
ccagtccttccccccatagtcaccgtggacacagagagcctggagcgtttggagcgggtg
gagcatggtctggccctgctgtgggagcgggtgcagcggggggaccagaggcaggagcag
cgtcacggggacaccctggcccagtacaccctcctaagggagcagctggacagccagaca
gacagggacagcctgggtctctgggtctctggcctgctggagcacaggatcaccctgctg
agaggagagctggagcagcaggaggcctcacacagggcacagactgatgagcagagggtt
cagcagcagcagagtcaggagacacggctagctgagctggaggtgctgctgcaggtcctg
gcttctaaaactgaggcggtgcaacagaaacggcaaccagagaaggagacaaccagacct
gcctctgtccctgtccctgtcagtgtgcgtgtggaccaggaggcccatgatgctttgctg
gcggaggtgcagaggctggaggcggagctgggtcggatcaggggcgacctgcagggggtg
atgggatgtcaggggaaatgtgagcagctggacacaatccaggaaacggtgtctacccag
gtgtcagcccaggtgaggcaggagctgcgggccctgttctacggctctgacgaccaggcc
catcagggagaaccagacatcccagagggtctcctccagtggctgtcgtcgcgctacgtg
agcggggccgacctgcaggccctcctggcctccctggagctcagcatcctgaggaacgtg
tccctgcagctggaacagagcagggccgaggcccacacggaggctgaggccagggctgca
gtcatcaccacccagacccagtctattacacagagtgtccaacataccgccgtgggcgag
ggactgtctgaggagcaagtgcagctgatcgtccagaatgccctgaaactctactcccag
gatcggacgggcctagtggactacgccctggagtctggaggtggtagcatcctaagcacg
cgctgctcggagacgtacgagaccaagacggccctcatgagtctgttcagcgtgcccctc
tggtacttctcccagtcaccccgcgttgccatccagcctgatgtgtatccagggaactgc
tgggcgtttaaaggttctcatggttacctggtcatccggttgtccctgaggatccttccc
acagccttctgtctggagcacatccccaaggccttgtcccctaccagcaacatcgccagc
gccccgcgcaacttcacagtatacggtctggatgatgagtatcaggaggagggaaagctg
ttgggtcaatacacctaccaggagaacggagactcaatgcagaagttccctgtcatggag
aagaacgacagggccttccagatcatcgaggtgcgggtgctgaccaactggggtcacccc
gagtacacctgcctctaccgcttcagagtccatggagaaccacgcatccagtga
DBGET
integrated database retrieval system
