Coregonus clupeaformis (lake whitefish): 121568790
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Entry
121568790 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: rho GTPase-activating protein 17
KO
K20638
Rho GTPase-activating protein 17
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121568790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121568790
Membrane trafficking [BR:
cclu04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121568790
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR
RhoGAP
BAR_3
BAR_2
Motif
Other DBs
NCBI-GeneID:
121568790
NCBI-ProteinID:
XP_041735150
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All DBs
Position
7:3589821..3672788
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AA seq
828 aa
AA seq
DB search
MKKQFNRMKQLANQTVGRAEKTEVLSDDLLQIERRMELVRLVSHNAHKRLVTCLQGHIGT
DAEKRHKKLPLTALSQAMQDGGSQLGEESLIGKMMDVCGEAESRLASELMQHEVQLEREI
LEPLNQLAEVDIPNILKQRKQLAKLVLDYDSARARWLQASKSIHFSTNNQATAAKAETLK
DEMDEALNKVEMCKDQLSADMYNFSSKEGNYARYYVILVEAQADYHRRSLAALEGVLPTI
QAQKDSWVEKPAYGTALEEHLKRSNREIALPLEACVMMLLETGMKEEGLFRIAAGASKLK
KLKAALDCSTSQLEEFYSDPHAVAGALKSYLRELPEPLMTFALYDEWTQASNVSDTDRRL
QALWVACDGLPKNHKANFRYLVKFLAKLAQDSEVNKMTPSNIAIVLGPNLLWSKTEGTLA
EMAAATSVHVVAIIEPIIQHADWFFPDDVDFNVSGMFVAMTPEPDPGPFERRHPSSLVDG
DSPRKDSPAPNKLGDHTPNPTPIPRRAATLNRKQHHHASSPAFQPPLPPPEAGGVPQTQP
VAEPQTQEQTLGGSTEAGQPGLAGGQGQGGVPEAQVAPGQQPLLLTQHSAEESSPGPTPP
PLRNGGSQLTMGTPHSQAGCRGPSPHIVRRGTKKQAPAPPKRANPFVANASTPGHTPGHS
PASNNPYPLITPRHHSVKETPIHAPSHPPPQPPXKPPQSQGESDPSPPHTPTPPSTPPHD
GPTSTPFTPLSSFHSGSLPRPTRPAPKPRPRPNVPPPPQPPANDDSNGTCGSASKVITDP
SLNLKGIGRALIPEITVDIQGESSAGHEPAPSPTPPSDSEIQLESTIL
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacagtttaatcgcatgaaacagctcgccaaccaaacagttggaagagctgag
aagactgaggtactgagtgatgaccttctacagattgagaggcgcatggagctggtccgt
ctggtgtcccacaacgcacacaagagacttgtcacctgtctacagggtcacatcggaaca
gacgcagaaaagagacataaaaagctccctctgacagcgctgtcccaggccatgcaggat
ggaggaagccagctgggggaggagtcactgattggtaagatgatggatgtgtgtggggag
gcagagagcagactagcgtctgagctgatgcaacacgaggtccagctagagagagagata
ctggaacctctcaaccagctagcagaggtggacattcccaacatcctgaaacagaggaaa
cagctggctaagctagtcctagactatgactcagccagagccaggtggttgcaggcaagc
aagtctattcacttttctaccaacaaccaggccacggccgccaaggcagagactctcaaa
gacgagatggacgaggccctgaacaaagtggagatgtgcaaggaccagctgtctgctgac
atgtataacttctcctccaaggagggaaactacgcccgctactatgtcattttggtagag
gcccaggccgactaccacaggaggtctctggctgctctggaaggagtcctgccgaccata
caggcacagaaagactcgtgggtggagaagcctgcgtacggcacggctctggaagagcac
ctgaagaggagtaaccgtgagatcgccctgcccttagaggcctgtgtcatgatgctgctg
gagactggcatgaaggaggagggtctgttccgaatcgctgctggggcctccaaactaaag
aagctgaaggcagcgctggactgttccacctcccagttagaggagttttactctgacccc
catgctgtagctggagctctgaagtcttacctcagagagctgcctgaaccccttatgacc
ttcgcactgtatgacgagtggacacaagcctccaatgtgtctgacacagacaggaggctt
caagctttgtgggtggcgtgtgacggtttgccaaagaaccacaaggccaacttcaggtat
ctggtaaagttcctagccaagctggcccaggacagtgaggtgaataagatgactcccagt
aacatcgccatagtgctgggacccaacctgctctggtccaagactgaggggactctggca
gagatggctgctgctacctctgtccatgtggtggccatcatagaacccatcatccagcac
gctgactggttcttcccagatgacgtggacttcaacgtgtcgggcatgttcgtggccatg
acccctgaacctgacccgggacctttcgagaggcgacaccccagcagcctggtggacggg
gacagtccccgcaaagacagccccgctcctaacaaactgggtgaccatacccccaacccc
acccccatcccacgtagagctgccactctaaatagaaaacagcaccatcatgcctcttcg
cccgccttccagccccctctaccaccgccggaggctggaggggtcccccagacccagcct
gtggctgagccccagacccaggagcaaactctgggtgggagtacagaggctggccaacct
ggcctggctgggggtcaaggtcagggtggggtaccagaggcccaggtggccccagggcaa
cagcctctgcttcttacccagcacagcgctgaggagagcagccctggccccaccccccct
cctctgaggaacgggggctcccagctcaccatggggacgccccactcccaggcaggatgc
aggggtcccagcccccacattgtgcgcagaggtactaagaagcaggcccctgccccaccc
aaacgggccaacccctttgtagctaatgcctccacccctggccacacccctggccacagt
cctgcatctaacaacccctaccccctcatcaccccacgacaccactctgttaaagaaacc
cccatccacgcccccagccacccacccccacagcccccanncaagcccccccagtctcag
ggggagtcagacccctctccgccccacactcccacaccccctagcacccctcctcacgat
ggtccaacctccacccccttcacccccctctcctccttccactctggctccctccctcgc
cccaccaggccggccccgaagccacgcccccgacctaacgttcccccgccccctcagccg
cccgccaatgacgacagcaacgggacctgcggctccgcctccaaagtcatcaccgatccc
agcctgaacttgaaggggattggccgagcccttatccctgaaattacggtggacatacaa
ggggagagctctgctggtcacgagcccgccccctctccaaccccaccctcggactctgag
atccaattagagagcaccattctgtga
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