Coregonus clupeaformis (lake whitefish): 121568825
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Entry
121568825 CDS
T08357
Name
(RefSeq) small G protein signaling modulator 3 isoform X1
KO
K20176
small G protein signaling modulator 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121568825
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
121568825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RUN
RabGap-TBC_2
SH3_1
SH3_2
SH3_9
Motif
Other DBs
NCBI-GeneID:
121568825
NCBI-ProteinID:
XP_041735193
LinkDB
All DBs
Position
Unknown
AA seq
766 aa
AA seq
DB search
MSGGYTPAPGGPFSALTSSMWPQDILAKYYQKDPTEEAEPQYDEFGFRLDSEDGVEPEPR
PEPQREDPQQRLRWQAHLEFTHNHTVGDLTWDLISPVLPRSERLRSLVLGGIPHSMRPQL
WMRLSGALQKKRTTEISYKEIVKNSTNDETTAAKQVLDAEIEKDLLRTMPSNACFCSLQS
VGIPRLRRVLRGLAWLYPDIGYCQGTGMVVSCLLLFLEEEDVLWMMCALIEDLLPPSYFS
STLLGVQTDQRVLRQLIVQYLPSLDRLLQEHDIELSLITLHWFLTSFASVVDIRILLRIW
DLLFYQGSVVLFQVTLGMLKIKEVDLLLSPLQEEELVSSENSASIFNTLSDLPSQLGDGA
AVLGEAMRLAGALSQDTLEAQRNKHLAYILNEQAQLNTNNSHTLNTNLNKVVRRQSLRRK
STLSSLLWGEDEAEALKSKNIKQTELVAALREAITRTAEHFHCLDPRHTSTDLTPDYSME
SHQRDHENFLVVSRNRRRRAKALLDFERHDDDELGFRKNDIVTIFSQKDEHCWVGELNGL
RGWFPAKFVEILDERSKEYSLAGDDSVTEAVTDLVRGTLCPALKAIFQHGLKKPSILGGP
CHPWLFLEEAASREVERDFNSVYSRLVLCKTYRLDEDGKVLTPEELLYRAVQSVNMSHDS
AHAQMDVKFRSLLCVGLNEQVLHLWLEVLCSSMPAVEKWYQPWSFLRSPGWVQIKCELRV
LSKFAFSLSQDCELPAKKEEKDQRPLKEGVQDMLVKHHLFSWDIDG
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtggttacactccggcccccgggggacccttctcagccctgacctccagtatg
tggccccaggacatcctggccaagtactatcagaaggacccaacagaggaggctgaaccg
cagtatgatgagtttggcttcaggctggacagtgaagatggtgtggagccagagccgagg
ccagagccccagagagaggacccccagcagaggctgcgctggcaggcccacctggagttc
acccacaaccacaccgtaggagacctgacctgggacctcatctcccccgtcctgccccgc
tctgaacgcctccgctccctggtgctgggtggcataccacacagcatgagaccacagttg
tggatgcgtctgtctggagctctgcagaagaagaggactacagagatctcctacaaagag
atcgttaagaacagcaccaacgacgagaccactgctgccaaacaggtactggatgctgag
atagagaaggacctgttgcggaccatgccctccaacgcgtgtttctgcagcctgcagagt
gtgggtattcccaggctgaggcgggtactgcggggcctggcgtggctctacccagacatc
ggctactgccagggcacaggcatggtggtgtcatgtctgctgctgttcctggaggaggag
gacgtgctgtggatgatgtgtgccctgatcgaggacctgcttcccccctcctacttctcc
tccaccctgctgggggtccagacggaccagagggtcctcagacagctcatagtccagtac
ctaccaagcctggacaggcttctccaggagcacgacatcgagttgtctctgatcacgctg
cactggttcctgacgtcgtttgccagtgtggtggacatccgcatcctgctgaggatctgg
gacctgctgttctaccagggctctgtggtcctcttccaggtcacactgggcatgctcaag
atcaaggaggttgaccttctcctctctcccctacaggaggaggagctggtgtcctcggag
aactcggcgtccatcttcaacacgctgtccgacctgcccagccaactgggtgacggggct
gcagtactgggggaggccatgaggctggcaggggcgctgtcccaggacacgctggaggcc
cagaggaacaaacacttggcctacatcctcaacgagcaggcccagctcaacaccaacaac
tcccacacactcaacaccaacctcaataaggttgtgaggagacagtcgttacgtaggaag
tccactctgagctctctgttgtggggtgaggatgaggcggaggcgctcaagtctaagaac
atcaagcagacagagctggtagcagcgctccgagaggccatcacccgcaccgctgaacac
ttccactgtctggacccccgacacaccagcactgacctgactccagactactccatggag
agccaccagagagaccacgaaaacttcctggtcgtgtctcgtaaccgacggagacgggcc
aaagccctgctggactttgagcgccatgacgatgacgaactgggcttcaggaagaacgac
atcgtcacgattttttcccagaaggatgagcactgttgggtgggagagctcaatgggctg
agaggttggtttccagccaagttcgtggagatcctcgatgagcggagcaaagagtactct
ctggcgggtgatgactcggtgacggaggcggtgacagacctggtcagagggacgttgtgt
cctgccctgaaggccatcttccaacacggcctgaagaaaccctccatactgggaggaccc
tgccacccctggctcttcttagaggaggcagccagtagagaggtggagagggactttaac
tcagtctactccagactggtgctgtgtaagacatacagattagacgaggatggcaaggtt
ctcacaccagaggagctgctctacagagcggtgcagtctgtcaatatgagccacgactct
gcacacgctcagatggacgtcaagttccgctccctcctctgcgtgggcctcaatgagcag
gtgttacacctgtggttggaggtgttgtgttccagtatgcctgcagtagagaagtggtac
cagccctggtccttcctacgcagcccaggatgggtccagatcaagtgtgagctcagggtt
ctctcaaagtttgccttcagtctctctcaggactgcgagctgcctgccaagaaagaggag
aaagatcagaggccactgaaggaaggagtccaagacatgttggtgaagcatcatctcttc
agctgggacatcgacggctag
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