Coregonus clupeaformis (lake whitefish): 121568834
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Entry
121568834 CDS
T08357
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 2
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cclu01100
Metabolic pathways
Module
cclu_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
121568834
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121568834
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
121568834
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
121568834
Glycosyltransferases [BR:
cclu01003
]
Glycan extension
O-Glycan
121568834
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Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
Cnn_1N
DUF2706
Motif
Other DBs
NCBI-GeneID:
121568834
NCBI-ProteinID:
XP_041735215
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Position
1:complement(41770074..41781124)
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AA seq
539 aa
AA seq
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MPRRSLPLQGRMRWMLLGLFLLLVLLLFAYLLECTPPADVSLVLPGLGGESHGKEYYQAL
LQEQEERHLSRAVSLKRQIAQLKQELQEMSEKLKVLQDRKEGPGVQGLVETKDQEPGDLL
EFLHSQIDKAEVNTGARLPSEYALVPFESFTSSKVYQLEMGLTRHPEEKPVRKDRRDELV
EVIEAALDVINNPDEEDGQEDDVPMQRQTYTESHFTEGLYRTERDKGTLYELFFAKADSD
NFRHVTLFRPFGPLMKVRSTSVETSGVIINIIVPLAGRTEAFSQFLHNFREVCIEHDRRV
HLTVVYFGQEGLQEVKSYLEKMSREASFSNYTLIPVDEEFSRGRGLDIGAHAWKKGDVLM
FFCDVDIYFTLDYLNTCRLHTHPNKRVFYPVVFSLYNPAIVYGNLELAPPIESQLIHKKD
AGFWRDFGFGMTCQYRSDFLSIGGFDLEVKGWGVEDVHLYRKYLRSDLIVTRTPVSGLFH
LWHEKQCADELTPEQYRMCIQSKAMNEASHSHLGMLVFREEIENHLRKQAYKTQSNTEN
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggcgaagcttgccgctgcagggccggatgcgctggatgctcctggggctcttc
ctgctgctggtcctcctcctctttgcttacctgctggagtgcactcccccagctgatgtc
agcctggtcctgcctggcctgggaggggagtcccatggaaaggagtactaccaggcactg
ctgcaagagcaggaggagcggcacctaagccgcgccgtcagcctcaagcggcagattgcc
cagctcaagcaggagctccaggagatgagtgagaagctcaaggtcctccaggacagaaag
gaaggtcccggggtccaggggctggttgagaccaaggaccaggagcctggggatctcctt
gagttcctccactcccagatcgacaaagccgaggtgaacactggagcacggctgcccagc
gagtacgccctggtccccttcgagagcttcacctctagtaaggtgtatcagctggagatg
gggctgaccaggcacccagaggagaagcctgtgcggaaggaccgcagggatgagctggtg
gaggtcattgaggcagccctggacgtcataaacaaccctgacgaggaggatggccaggag
gatgatgtgcccatgcagaggcagacctacaccgagagccactttactgaggggctatac
agaacagaacgggacaaaggcacactctacgagctcttctttgcaaaagcggactccgac
aacttccgccatgtcactcttttccgtccttttggtcctttaatgaaagtcaggagcacg
tcagtagaaacgtccggagtcatcatcaatatcattgtaccattggcaggcagaacagag
gcattctcacagttcctacacaacttcagggaagtttgcatagaacacgataggcgagtg
catcttacagtggtctactttggacaagagggcttacaagaggtgaagtcttatttggaa
aaaatgtccagggaggcaagcttttccaactacacacttatcccagtggatgaggagttt
tccaggggcaggggtctggacatcggtgcccatgcctggaagaagggtgacgtgttgatg
ttcttctgtgatgtggatatctacttcacactggactatctcaacacctgccgtcttcac
acccatccaaacaagagagtcttttatccggtggtgttcagtttgtataatcctgccata
gtctacgggaatctggagctggctccccccattgaaagtcaacttattcacaagaaagat
gctggattctggagagattttggctttggaatgacgtgtcagtaccgctcggacttcctc
agtataggaggttttgacctggaagtgaaaggttggggtgtggaagatgtccacttgtac
aggaagtacctgcggagcgacctgatcgtgacgcgtacgccagtatccggcctcttccac
ctgtggcacgagaagcagtgtgcagacgagctgactccagaacagtatcgcatgtgcatc
cagtccaaagccatgaacgaggcgtcccattcccacctgggcatgctggtgttccgcgag
gagatcgagaatcacctccgcaagcaagcctataagacccagagcaatactgaaaactga
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