Coregonus clupeaformis (lake whitefish): 121568849
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Entry
121568849 CDS
T08357
Name
(RefSeq) long-chain fatty acid transport protein 1-like
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03320
PPAR signaling pathway
cclu04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
121568849
09158 Development and regeneration
04382 Cornified envelope formation
121568849
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cclu01004
]
121568849
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121568849
Lipid biosynthesis proteins [BR:
cclu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
121568849
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
121568849
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
121568849
NCBI-ProteinID:
XP_041735236
LinkDB
All DBs
Position
7:6558499..6568887
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AA seq
648 aa
AA seq
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MRNAASASVSLGSLGLLRLFGVPWSWSFAAGFGVFLGTGGWKYLYIVVRTAKRDLNGLYV
LLRVKIALWHHLRRNSNIPSIFAQTVKQHPNKPALIYDATGETWTFTQLDLLSNAVAQWA
LAQGWAPGDVVALFMESRPLQVALWLGLAKVGVEAALINFNLRRDALLHCVGMSASRGIV
FGAELAGAMLEVSSSLSPSMVRFCTGELSVDCLASLAAQNLDPILASAPTLPPPPCIPPK
SFNDRLFYIYTSGTTGLPKAAIVVHSRYYRIAAFGYHAFRMRQDDIIYDCLPLYHSAGNI
MGVGQCLINGLTVVVKKKFSASRFWEDCIKHNCTVVQYIGEICRYLLSQPVRPSEKGHQV
RLAVGNGLRPSVWEAFTERFGVAQVGEFYGATECNCSIANMDGKVGACGFNSRILPNVYP
ICLMKVDEETTELVRDRHGLCVPCRPGEPGLLVGRINQQDPLRRFDGYANQDDTRKKIAN
NVFKKNDSAYLSGDVLVMDELGYMYFRDRSGDTFRWRGENVSTTEVEGTLSGLLGQADVA
VYGVYVPDVEGKAGMAAIADPTGTFDCDAFLREVQQALPPYARPVFLRISPQVDTTGTFK
IQKTRFQREGYDPRISTDQIYFLNSRAGRYEAVNEELHSAIVEGRMAL
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaatgcagccagtgcctctgtgtctctgggatcgctgggtctgctgcgtctcttc
ggggtcccctggtcctggagctttgcagcaggcttcggggtctttctgggcacaggcggt
tggaagtacctctacattgtagtccgcactgccaaaagagacctcaatggcctttacgtg
ttgttacgagtcaagatagccttgtggcaccacctacgacgcaacagcaatatcccctcc
atctttgcccagacggtgaagcagcacccaaataaacccgccctcatctacgacgccaca
ggagagacgtggaccttcacccagctggacctgctgtctaacgctgtggcccaatgggct
ctggcccagggctgggccccgggggatgtggtggccctcttcatggaaagccggcccttg
caggtggccctctggctgggcctggctaaggtgggggtggaggcagccctcatcaacttc
aacctgcggagggacgcgctcctgcactgtgttggaatgtctgcgtccagagggatcgtg
ttcggagccgagctggctggtgccatgttggaggtgagctcatccctgagcccgtcgatg
gtgcggttttgtactggagagctcagtgtagactgtctggcctccctggctgcccagaat
ctggaccctatcctggcctcggcccctacactgccccctcctccctgcatcccacccaag
agcttcaatgatcgtctgttctatatatacacctcaggcaccacaggactccctaaagct
gccatagtggtgcacagtcggtattaccgtatcgctgcgtttggctaccatgctttccgc
atgcgccaggatgacatcatctatgactgccttcccctctaccactctgcaggtaacatc
atgggtgtaggccagtgtctcatcaatggactcactgtggtggtgaagaagaaattctca
gccagtcgcttctgggaagattgcatcaagcacaactgcactgtggtacagtacataggg
gagatctgtcgctacctgctgtcccagccggtgcggccatctgagaagggtcaccaggtt
cgcctggcggtggggaatgggctacgccctagcgtctgggaggccttcaccgagcgcttt
ggggtggcccaggtcggagagttctacggagccaccgaatgcaactgtagcatcgccaac
atggacggcaaggtgggagcttgtgggttcaacagccgcatccttcccaacgtgtatccc
atctgcctcatgaaggtggatgaggagaccacagagctggtgcgggacaggcacggcctg
tgtgtgccctgccgccctggggagccagggctgctggtgggaaggatcaaccaacaggac
ccgctacggaggtttgatggctacgccaaccaggacgacaccaggaagaagattgccaac
aacgtcttcaagaaaaacgactctgcatatctgtcaggggatgtgttggtgatggatgag
ctgggctacatgtacttccgggaccgcagtggggacacgttccgctggagaggagagaac
gtctccactaccgaggtggagggaacactgagtggtctgctgggccaggctgatgtggct
gtgtatggggtatatgtaccagatgtggaaggtaaggcagggatggctgccatcgcagac
ccaacagggacatttgactgtgatgcgttcctgcgagaggtccaacaggccctgccccct
tacgcccgccccgtgttcctacgcatttccccacaagtagacaccacaggtacctttaaa
atccagaagacccggtttcagagggagggatacgacccgcgcatatcaactgaccagatc
tactttttgaactccagagcagggcgttatgaggctgtgaatgaggagctacacagtgct
atagtggagggtaggatggctctatga
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