Coregonus clupeaformis (lake whitefish): 121568859
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Entry
121568859 CDS
T08357
Name
(RefSeq) sphingosine-1-phosphate lyase 1-like
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00600
Sphingolipid metabolism
cclu01100
Metabolic pathways
Module
cclu_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
121568859
Enzymes [BR:
cclu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
121568859
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Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
SepSecS
Motif
Other DBs
NCBI-GeneID:
121568859
NCBI-ProteinID:
XP_041735255
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Position
1:complement(41893515..41917353)
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AA seq
570 aa
AA seq
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MDCWSALEVYKEMLLLYLDEGRQLVNTNCEELEPWQIIGATLISTLGAVWVKGFLFQQET
LTSRIKKQCFRLVRKIPFVGAAIQTQLNKALDDMSVSLCTLKEGMSYIKQLPEQGLTQVE
VLDRISEYETLNEVDWEKGRVSGAVYWGDQTLTKLLVKVYGDFAWSNPLHPDIFPGVRKM
EAEVVRMTCTLFNGGPNTCGTVTSGGTESILMACKAYRDMAYERGVKHPEIIAPVSVHAA
FDKAANYFGMKLVHIPLDKKTMKVDVKAMRRAISKNTAMLVCSAPQFPHGIIDPIEEVGK
MALKYNLPLHVDACLGGFLIVFMAKANYPLAPFDFRVKGVTSISADTHKYGYAPKGSSVI
LYSDKKYRHYQYFVAPDWQGGIYASPSVAGSRPGGIIAACWATMMHMGEDGYIKATKKII
DTARTINTEIRKINGVFVFGDPEVSVVAIGSDVFDIFRLSNALTSKGWNLNTLQYPSSIH
ICCTVLHTHEGVAKQLISDVKEQVALILKNPNEKTTGMGAIYGMAQSIPDRSMVTEISRG
FLDCLYSTEEPKSSQPQKTHMNGNSNGKAH
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggactgttggagtgccttggaggtgtacaaggagatgctgttgctctacctggacgaa
ggcaggcagcttgtgaacaccaactgtgaggagctggaaccatggcagatcattggagcc
actctcatctcgaccttaggagcagtctgggtcaaaggcttcctgtttcagcaagaaacc
ctgacatcccgaatcaagaagcagtgctttcggctcgtcagaaaaataccctttgttggc
gcggcaatccagacccagctgaacaaggccctggatgacatgtctgtcagtctttgcaca
ctgaaggagggtatgagctacatcaaacagctgcctgaacaagggctaacccaagttgaa
gttctagacaggatcagcgagtacgaaacactgaatgaagtggattgggagaaaggacga
gtgtcgggtgcagtatactggggagatcagacacttaccaaacttttggtgaaggtgtat
ggagactttgcatggagcaacccacttcacccagacatctttcctggtgtgaggaagatg
gaggcagaggttgtgagaatgacgtgtaccctcttcaacggtgggcccaacacatgtggc
acagtcacctcaggaggaactgaaagcatattgatggcatgcaaggcgtacagagacatg
gcctatgagcgcggtgtgaaacatcctgaaatcattgcaccagtcagtgtccatgcagcc
tttgacaaagcagcaaactactttggaatgaagcttgttcacatccccctggacaaaaag
acaatgaaagtggatgttaaggctatgaggagagccatcagcaagaacacagccatgctt
gtatgttctgcaccccagttcccccatggaatcattgatcctattgaggaagtaggaaag
atggctttaaagtacaacctccctctgcatgtggatgcttgtttgggagggtttctcatc
gtgttcatggccaaagccaattacccactggctccctttgacttcagggtaaagggtgtg
accagcatatctgcagacacacacaagtatggctacgcccccaaaggttcatcagtgatc
ctgtatagtgacaagaagtacaggcactaccagtactttgtggctccggactggcagggg
ggcatctatgcgtccccatcagtggcaggttctcggccaggcggtatcatcgcagcgtgt
tgggctaccatgatgcacatgggagaggatggctacataaaggccaccaagaagataatt
gacactgcacgcaccatcaatacagaaatccgtaagataaacggtgtgtttgtgtttgga
gaccctgaagtatccgtggtggcaataggctctgacgtcttcgacatttttcgtttatcc
aacgcactgacgtcaaagggttggaatctcaacacgctacagtatccatccagcatccat
atctgttgtactgtactgcacacacatgaaggtgtggccaaacagttaatcagtgacgtc
aaagagcaggtggctctcattttgaagaaccccaatgagaagaccactggaatgggagca
atctatggcatggcccagtccatccctgacagatccatggtgacagagatctcccgaggc
ttcctggactgcctctacagcacagaggagcccaagtcgtctcagcctcagaagacccat
atgaatggcaacagcaacggcaaggcccactga
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