Coregonus clupeaformis (lake whitefish): 121568874
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Entry
121568874 CDS
T08357
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3-like
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121568874
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
121568874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
121568874
NCBI-ProteinID:
XP_041735273
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MEIEGRDFMNTPPLKTVRFGGNVVATLAKFKQGDTSDYELLKHQLADPDIKDAQIINWLQ
EFRNCVTQLSKDHEQLIYVALRLPWLGRSPAVVEEYLAFLSNLVSAQTVYLRACLKMVVS
NFTPKRVKICEGGVDISDSDDDDENLPRNFDQCHQALQLIARYVPSTSRFLMPILIENFP
FVQKSSRTLECYVHNLLRVAVYIPSLRRDILELIISRMLKLDVSAPRGEIEEVEENAVQQ
EMKGEQEEEGLFDMDEDVCSVKSSPAETNVMVHPVAERLDTLMAVLLAFIKDMCHVNGCL
DVERTKDLYKDLVCVFDKLILPTHASCHVQYALFYLCSFRLALAEAFLEHLWRLLQSPSH
PAVLRQAAAGYMGSFLARANFLPVATVRACLDLLVPWLHLYIDSQDSGSRAYCDITLHGP
FYNACQAVFYALLFRHRSILEGNMRKGLAYLQGLNLERIVMCQLNPLKVCLPAVTNMFAA
ITRKYQLVFCYTIIERNNRHVLPVVRSSVGGDCVSTNTNPLDSFFPFDPYLLKRSSKLIE
PLYQVWEEPADTEMDTVTTKRVRRCSDADEDDFLRGETPETKGVVGMTPGSYESHLRSPS
SVGSPPIAFLQRPF
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggagattgaggggagagatttcatgaacactcccccattgaagacggtgcggtttggg
ggcaatgttgttgccacgttagcgaaattcaaacagggagataccagtgactatgagttg
ttgaaacatcagctggcagatccagatatcaaggatgcccaaatcatcaactggctgcag
gagttccggaactgtgtgacacaactcagcaaagaccatgagcagctgatctatgtggct
ctgagactgccgtggctgggccgaagccctgccgtagtggaggagtatctggccttcctc
agtaacctggtatctgctcagacggtctacctccgcgcctgcctcaagatggttgtctcc
aacttcacacccaagagagtaaagatctgtgagggaggagtggacatctccgactcggat
gatgacgatgaaaaccttcccagaaattttgaccagtgtcatcaggccctgcagctgata
gccagatatgtcccatccaccagccgtttcctgatgcccattctgattgaaaactttcct
tttgtgcagaaatcttccagaaccctggagtgttatgtccataaccttctgcgggtggca
gtgtacatcccctcgctacgacgagacatcctggagctcatcatcagtaggatgctcaaa
ctggacgtgagtgctcctcggggagagatagaggaggtggaggagaacgctgtgcagcag
gagatgaaaggagagcaggaggaggaggggctctttgacatggatgaggatgtgtgttca
gtgaagtccagtccagcagagaccaatgtgatggtccaccctgtcgctgagagactggac
actctcatggctgtgctgctggccttcatcaaggacatgtgccatgtcaacggttgtctg
gatgtggagcggactaaggatctgtacaaggacctggtgtgtgtgtttgacaaacttatc
ctacctacacacgcctcctgtcacgtccaatacgccctcttctacctctgcagcttcaga
ctggctctggcagaggcgtttctggaacacctgtggaggttactgcagagcccgtctcac
ccggcagtactgcgccaggctgccgctggctacatgggcagcttcctggcccgtgccaac
ttcctgcctgtcgctacagtgcgtgcgtgtctggacctgctggtcccctggctccaccta
tacatagacagccaggactccggctcccgggcctactgtgacatcacgctgcacgggccc
ttctacaacgcctgccaggccgtcttctacgcactcctcttcagacacagaagcattctg
gagggcaacatgagaaaagggctggcgtacctgcagggtctgaacctagagaggatagtg
atgtgtcagctcaaccctctgaaggtctgcctgcctgccgtcaccaacatgtttgctgcc
atcaccagaaagtaccagttggtgttctgctacacaatcatcgagaggaacaaccgccat
gttctccccgtggtccgcagttccgtggggggcgactgtgtgtccaccaacaccaacccc
ctggacagtttcttccccttcgacccctacctgctcaagaggtcaagtaaactcatcgag
cccctctaccaggtgtgggaggagccagcagacactgaaatggacactgtcaccaccaag
agagtcagaaggtgctcggatgcagatgaggatgacttcctgcgaggggagacgccggag
acaaagggggttgtgggtatgacccccggctcgtatgagtctcacctccgcagccccagc
agtgtgggctccccgcccatcgccttcctacagagacccttctga
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