Coregonus clupeaformis (lake whitefish): 121568882
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Entry
121568882 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: ankyrin repeat and SOCS box protein 16
KO
K10338
ankyrin repeat and SOCS box protein 16
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121568882
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
121568882
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_5
Ank_3
SOCS_box
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
121568882
NCBI-ProteinID:
XP_045079249
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Position
10:complement(64991310..64994169)
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AA seq
464 aa
AA seq
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MSSDTFAFSSAALHSLKVDQELQEWEDKRQALAHRRAMSRPPVSRASRPPPRQQRGLQEI
RVFEARCRDTTIHNTFMCGDMKGVHTVLKDPCMINALMETVHEEMVWAPELGMWTLSSKI
KQTSALRLAASRGHSGCVEELLFRGAEVDADPGGSTALHDACIGGHDNCVQLLLAHGADP
DLLAEDGSAPLHLCSTTQTFQCAELLVTGGADVNVLTSETKLTPLHVAARRGLEEHVKLF
LSKGADVSARNREGETPLNAACGGAERPVEAGRHLRVVQMLLGAGADPCTAGRKHHTPLH
NACSNCSPRIAEILLQHGAKADVQNCAGYTPMDCLLQVVEDYPDQHPEAVARSLLNHGAK
AGKSLMLKLCLPSPATLEVMLNCYAVVPSCEEWMESIPLEIHEAHQGFFDSVRQMTSQPR
TLQHLCRCALRRHLGKGIDAAISRLDIPSSLMEYLLLRNDGEIR
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtgatacatttgccttcagctcagccgccttgcattctctgaaagtggatcag
gagctccaggagtgggaggataagcggcaggcattggctcacaggagggccatgagtcgg
ccacctgtgtcccgggcctccagaccccctcccagacagcagcggggcctccaggagatc
cgggtctttgaggcccgatgcagagacaccacaatccacaacaccttcatgtgtggggac
atgaagggagtacacactgtgttgaaggacccctgcatgatcaacgcactgatggaaaca
gtacatgaggagatggtgtgggctccagagctggggatgtggaccctgagctccaagatc
aagcagacatctgcattgcgtctggcagccagcaggggacactcaggctgtgtggaggag
ttgctgtttcgaggggcggaggtggatgccgaccctggtggcagcacagccttacatgat
gcctgtataggtggccatgacaactgtgtccagctgctgctagcccacggagcagaccct
gacctgctggcagaggacggcagcgcaccccttcacctctgcagcaccacccagacattc
cagtgtgctgagctgctggtgacgggtggggcagacgtcaacgtgttgaccagtgaaaca
aagctaacgcccctccatgtggcggctcgtcgaggtctggaggagcatgtgaagctcttt
ctgtccaaaggagctgatgtgtcagccaggaaccgtgagggggaaacccccctgaacgca
gcctgtggtggggctgagaggcctgtggaggcggggcggcacctccgcgtggtccaaatg
ctgctgggagctggggctgacccctgcactgcaggcaggaagcaccacacacctctgcac
aacgcctgtagtaactgcagcccacgcatcgcagaaattttactacagcatggagccaaa
gcagacgtgcagaactgtgcaggatacacacccatggactgtctgttacaggtggtggag
gactatccagaccagcatcctgaggcagtagcacgctccctcctaaaccacggggccaag
gccggtaaaagcttgatgctgaagctctgcctcccttcccctgccactctggaggtaatg
ctgaactgctatgctgttgtcccttcctgtgaggaatggatggagtctatccctcttgag
atacatgaggcgcaccagggtttctttgactctgtcaggcagatgactagtcagccccgc
accctgcagcacctgtgccgctgtgctctgcgccggcacttaggaaaaggtattgacgca
gctatcagtagattggacatccccagctctctgatggagtatctactacttcggaatgac
ggggagatccggtga
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