Coregonus clupeaformis (lake whitefish): 121569012
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Entry
121569012 CDS
T08357
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA1
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
121569012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121569012
Membrane trafficking [BR:
cclu04131
]
Endosome - Golgi transport
Others
GGA
121569012
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
GAT
Alpha_adaptinC2
GGA_N-GAT
ImmE5
Hrs_helical
TP_0813_N
CEP70
DUF2959
PCRF
Motif
Other DBs
NCBI-GeneID:
121569012
NCBI-ProteinID:
XP_041735527
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MVKGIPVVMAAPPDTESLESRINKATNPLNRDTHWDSIQAFCDQLNNDLEGPQLATRLLA
HKIQSPQEWEAMQALVVLETCMKSCGERFHSEVGKFRFLNELIKVVSPKYLGTRAPEPVK
KKVLELIYSWTLGLPDDAKIADAYQMLKKQGIVKQDPVLPADKLLPLPPPRPKNAIFEDE
EKSKTLASLLNSTHPEDLKAANKLIKEMVQEDQKRAEKVSKRVNAIQDVNESVSLLTQLL
EDYDRTTNPQSNAELIQDLYQRCEKMRPTLFRLASDTEDNDEALAEILQANDSLTQVINL
YRQQVKGEVVNGNNSANTQRLTGSSTALLDLSGLDTSPQSHHSYPEFPTPTDSLNAPSQE
MGIGLLDDELMSLGLSEGTHTSNPASQPEDSTAWDSFQSSDSVDIPAAPSVLLSPEPPPY
IQPLSTGATSGSSALDELDLLGKTLLQQSLPPEGLQVKWDKQPFKPTLRDLQNKSGANPS
PIPAFSPEHPVALLGDRLLDTSPVHTVIPPIEMTLTDVFVPLESIKPSSLLPLTVFDGHS
LRVLFHFARDSPPSLPDVLVVIISMLSSAPVPVSNILFQSSVPNTMRVKLQPPSGTELPA
FNPILPPAAITQIMLLANPHKEKVQLQYRLTFTLGEEDHDESGVVEQFPPSDTWGNL
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagggaattcccgtagtgatggcggcgccgcctgacacggagagtttggagtca
cgtatcaacaaggccacaaacccactaaacagagatacacattgggacagcatccaggcc
ttctgtgaccagctcaacaatgatttggagggaccccagctggccaccaggctactggct
cacaagatccagtcacctcaggagtgggaggccatgcaggcactcgtggtgctggagacg
tgcatgaagagctgtggggaaaggttccacagtgaggtgggcaagtttcgctttctcaac
gagctcatcaaagtggtctctccaaagtaccttggcacccgggctccagagccagtgaag
aagaaggtgttggagctcatctatagttggacactggggctgcctgacgatgcaaagatc
gctgatgcctaccagatgcttaaaaaacagggcattgtcaaacaggacccagttcttcca
gctgacaaactcctcccgcttccacctcccagaccaaaaaatgccatatttgaagatgag
gagaagtcaaagacactggctagcctgttgaacagcacacaccctgaggacctgaaagca
gccaacaaactgatcaaggaaatggtgcaggaggaccagaagcgggcggagaaggtgtcc
aagcgtgtgaacgccatccaggatgtgaacgagagtgtcagcctactgactcagctgctg
gaggactatgacaggaccaccaacccacagagcaatgcagagctcatccaggacttgtac
cagcgctgtgagaagatgagacccacattgttcagactggccagtgatacggaggacaat
gatgaggctctggcggagatcctccaggccaacgacagcctgactcaggtcatcaacctg
tacaggcagcaggtgaagggggaggtggtgaacgggaacaattcagctaatacacaaagg
ctcacaggaagtagtacggcgctgcttgatctatcgggattggacacgtcgccccagtca
catcattcctacccagaattccccactccaacagacagcctaaatgctccctctcaggag
atgggcatcggtctccttgacgatgagctaatgtcactaggtttgagtgaggggacccac
acctccaacccggcctcccagcctgaggactctaccgcctgggactctttccagtcttcc
gacagtgttgatatcccagcagcgcccagtgtattactgagtccagagccgcccccctac
atccagcctctttccactggagccacgtctggaagttcagccttagatgagttggatctg
ctggggaagacgctgctgcagcagtccctacctccagagggcctgcaggtcaaatgggac
aagcaaccgttcaaacctactctacgagatctccagaacaaatctggagctaatccaagt
cctatcccggccttctcccctgagcacccggtggctctcctaggtgataggttgttggac
acctctccggttcacacagtcattccccctatagaaatgaccctgacagatgtttttgtg
ccgcttgagtccattaagcccagcagcctgttgcctttgacggtgtttgacggccacagt
ttgcgggtgctcttccactttgcacgtgactctccgccctctcttcctgatgtgctggtg
gtgatcatctccatgctctcctccgccccggttccagtcagcaacatcctcttccagtcc
tctgtccctaacacaatgagagtgaagctacagcccccatcaggaacagagcttccagcc
ttcaatcccatcctcccacctgctgccatcacacagataatgctgctggccaaccctcac
aaggagaaggtgcagttgcaatacaggctaaccttcacgctaggagaggaagaccatgat
gaaagtggagttgtagaacagtttccaccttcagacacgtggggcaatctttaa
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