Coregonus clupeaformis (lake whitefish): 121569033
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Entry
121569033 CDS
T08357
Name
(RefSeq) ran GTPase-activating protein 1 isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121569033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121569033
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
121569033
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
CobT
BUD22
Nop14
Motif
Other DBs
NCBI-GeneID:
121569033
NCBI-ProteinID:
XP_041735553
LinkDB
All DBs
Position
7:complement(21576381..21582110)
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AA seq
564 aa
AA seq
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MATDVVAQLADSLAKTQVTEGELSYKGQGRKFDNAQSVEEMVKEIQEFKGLQALRLEGNT
YGVEAAQAIAKALETKSEFKYCYWSDMFTGRLRSEIPPALNSLGAALMTAGARLTLLDLS
DNAFGPDGVKGIEKLLKSTACHTLQELRLNNCGMGIGGGKILAAALTECYKQSSAQGTPL
GLKVFIAGRNRLENDGATALAQAFQLMGSLEEVHVPQNGINHHGVTALATAMQHNPQLRV
LNLNDNTFTKKGAIAMAQALKHLRSVQVINFGDCLVRSEGAIAIAEAVTEGLPILKELNL
SFGEITGEAALLVAQSVEGKATLEKLDLNGNCLGEECCDALRAVMDGLNMGDLLGSLSDD
EGEPEDEEEEEDDYEEDDDEDEEEEEEDSSVNQVSSPPSVPQPPDAASFLCFPSPDKLLK
LGTKRALLFEQQVDVADAGKTAEAFLKISSVYKEEDEEVKSAVLDSIDAILRKAFASPSF
QGYNFVSSLLVMLGLLKSEDKVRPVRVVPGHLQALEYAVRQDYFPQEHIAVLEAFMSRHI
QALESCSSARNILKSTLEQVRPES
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgatgttgttgcacagttggccgattctctggccaaaactcaggtgactgag
ggagagttgagctataagggccaaggacgcaaattcgacaatgcacaatctgtggaagag
atggtgaaagagatccaggagttcaaggggttgcaagcgctcaggctggaggggaacact
tatggggtggaggcagcacaggccatcgctaaagccctggagacaaagagtgaatttaag
tactgttactggagtgacatgtttactgggcgactgcgttctgagatccctccagccctg
aactccctgggtgcggccctgatgacagcaggcgccagactgaccttgctggacctcagt
gacaacgcctttggaccagacggggtgaagggcatcgagaagttgctcaagagcactgcc
tgtcacacgctgcaggaactgcggctcaacaactgcggcatgggcattggtggaggcaag
atcttagctgcagcgttgacggagtgctataagcagtccagtgcacagggcacccccctt
gggctgaaggtgttcatcgcaggcaggaaccgtctggagaatgatggggccactgccctc
gcccaggccttccagctgatgggtagtctggaggaggtgcacgtgccccagaatgggatc
aatcaccatggggtgactgctctggccactgccatgcaacacaacccccagctccgggtc
ctcaacctcaacgacaacaccttcaccaagaaaggagctatcgccatggcacaggctctg
aaacatttgcgtagtgtccaggtgataaactttggagactgtctggtgcgttccgagggg
gctatagccatcgcagaggcagtcactgaggggcttcccatcctcaaggagctgaatctg
tcattcggggagattacaggagaagctgcactgctggtggcacaatcagtcgagggcaaa
gccacactggagaaactggacctaaatggtaactgcctgggggaggagtgctgtgatgcc
ctcagagcggtaatggatggcctgaacatgggagacctgctgggatcactcagcgatgat
gaaggggagcctgaggatgaggaggaggaagaggatgactatgaggaggatgatgatgaa
gatgaggaggaggaggaggaggacagcagtgtgaatcaggtgtcctcccctccgtcagtg
ccccaacccccagatgccgcctccttcctctgcttcccctccccagacaagctgctcaaa
ctgggcaccaagagggccctgctcttcgaacagcaggtagatgtggctgatgctggtaag
acagcggaggctttcctgaagatctcctctgtgtacaaggaggaagatgaagaggttaag
agtgctgtcctggacagtattgacgcaattctcaggaaagccttcgccagcccctccttc
caaggttacaactttgtatcatcgctgttagtaatgctgggactcctcaagagtgaggac
aaggtgaggccggtgcgtgtggtgcctggtcatttgcaggcgctggagtacgccgtacgt
caggactacttcccccaggagcacatcgctgtgctggaggccttcatgtcccgacacatc
caggccctggagtcgtgcagcagcgccaggaacatcctcaagtccacgctggagcaggtc
aggcctgagagctga
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