Coregonus clupeaformis (lake whitefish): 121569113
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Entry
121569113 CDS
T08357
Name
(RefSeq) putative E3 ubiquitin-protein ligase UNKL isoform X1
KO
K23047
E3 ubiquitin-protein ligase UNKL [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121569113
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121569113
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121569113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_11
zf-CCCH_UNK-like_4th
zf_CCCH_5
zf-C3HC4_3
zf-CCCH
Prok-RING_4
DUF932
zf_CCCH_4
CT398_CC
Borrelia_P83
ERM_helical
FapA
DUF3450
Motif
Other DBs
NCBI-GeneID:
121569113
NCBI-ProteinID:
XP_041735694
LinkDB
All DBs
Position
7:27327179..27349681
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AA seq
823 aa
AA seq
DB search
MPSVSKTAANASPQTEKPTHYTYLKEFRTEQCPLFLQHKCTQHRPFTCFHWHFLNQRRRR
PIRRRDGTFNYSPDVYCTKYDETTGICPDGEDCPYLHRTTGDTERKYHLRYYKTGTCIHE
TDARGHCVKNGLHCAFAHGPHDLRPPVYDISSSLTDLLHVHREIQAQEALQNGHLGSGEG
IPDLQPGVLASQAMIEKTLTEDPRWQDTNFVLANYKTEQCTKPPRLCRQGYACPHYHNSR
DRRRNPRKFKYRSTPCPNVKHGDEWGEPSKCDSGDSCQYCHSRTEQQFHPEIYKSTKCND
MRQTGYCPRGPFCAFAHVERIPSTEETMNSLLTAMQSGSQAKLGSQQYSECPVSEWGSSA
NSISSSNNGQVGNVSYSNSPTVTPSSGSNSSLSPIGPIGRSKCLTNGSLCSESTTSSVSS
LTSNYPKAPGFEREDQIKNHKGHSDQKMMDQDKQTHTSVFSGMNPLASSITSSITSSLAS
SIGSDSSSPTTLSTMNAKATPFYPGSNTVESVIGSALDLNFCDINVASLDKEFEEQENKS
IGLSQRMLGGSAPVNIPGSLARSSSLNSNSSLSASPLSSLSQSLSQCLLSGMAPQQSQPQ
GLLTKPEHGLLGTPTSSQNTLGLNGGASSIWDFVSGNFSPSPSPVFSSLGSTTVSSSADL
NRLFRELDEAKRKIKQWEDAWPQVKQACEAWQKDSHDAKEQAKSAEAERQLAEQKREDTE
RKLKELQGDFDVLCRSPGTPLLRSYGDLDQLPLPKLHSIQSQLRTDLDLIDGVIYQLQSK
KCIVCQTHDRCIVLQPCQHYVLCKNCAPSKSECPYCKTKILKW
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcggtttcgaaaacggcggcgaacgcttctcctcaaacggagaaaccaacccac
tatacatatttgaaggagttcaggaccgaacagtgccctctattcttgcaacacaagtgc
acacaacatagaccctttacatgttttcattggcatttcctcaaccagaggcgaagacga
ccgattagaagaagagatggaacttttaactacagccctgatgtttattgcacaaaatat
gacgagactacaggcatttgcccagatggagaggactgtccttacttgcaccggaccact
ggtgacacagagcgcaagtaccatcttcgctattacaagactggtacctgtatccatgaa
accgatgcccgcgggcactgtgtgaagaacggcctacactgcgcctttgcccatggccca
catgatctccgcccccctgtctacgatatcagtagctctctgactgatcttcttcatgtg
cacagagagatccaggcacaggaagccctccagaatggccatttgggatctggagagggt
atccctgatctacagcctggggtactggccagccaagccatgatagagaagactcttaca
gaggacccccggtggcaggacaccaattttgttttagcgaactacaaaacagagcagtgc
accaagcctccacgactatgcagacagggctatgcctgcccccactaccacaatagtaga
gacagaagacgaaatccacgcaagttcaaatacaggtcaactccgtgtcccaatgtgaaa
catggggatgagtggggagagccatcaaagtgtgacagtggagacagctgtcaatactgt
cactcacgcactgaacagcagttccacccagagatctacaaatccaccaaatgcaatgat
atgaggcaaactggttattgtcctagggggccgttctgtgcgtttgcgcatgtagaaaga
attccctccacagaagagaccatgaactcgttgctaacagcgatgcagtcaggctcccag
gccaagctgggctctcagcagtattcagagtgtccagtcagcgagtggggcagcagtgcc
aactccatcagcagcagcaacaacggccaagtggggaatgtttcatattctaatagtccg
actgtaacgccaagctcaggaagcaacagttcattgtccccaatcggacccatcggcagg
tccaaatgcttaactaatggtagcttatgttcagagtccaccacgtcaagtgtgtcatct
ctgacgtctaactatcccaaagctccgggctttgaacgcgaggatcagataaagaaccat
aagggacatagcgatcaaaagatgatggaccaagacaagcagacacacactagtgtattc
tctgggatgaaccctctggcatccagcataacctccagtataacatctagcctggcctcc
agtattggctcggatagttcctcacccaccaccttatcaacaatgaatgcaaaagcaacc
ccattctatcctgggagcaatactgtggagtcagttataggttctgctcttgacctgaat
ttttgtgacatcaatgttgcctctcttgataaagagtttgaggagcaagaaaacaaaagt
attggtttaagtcaaaggatgttgggaggatccgctccggtcaacattcctggctccctt
gcacggtcctcttcattgaattccaactcatcactctctgcctcccctctgagctccctc
tcccagtccctctcccagtgcctgctgtcaggaatggctccccagcagagtcagcctcag
ggcctgctaaccaaacctgagcatggccttctaggaacacctacctcctctcagaacact
ctgggtttgaatgggggagctagcagcatatgggactttgtgagtggcaacttctctccc
agcccatcaccagtgttcagcagcctgggctccaccactgtgagcagcagcgctgacctg
aaccggctcttcagggagctggacgaggccaagaggaagatcaagcaatgggaagacgcc
tggccccaggtcaagcaggcatgtgaagcctggcagaaagactcccatgatgcaaaagaa
caagcaaagtcggccgaggcggagcggcagctggcggagcagaagcgagaggacacggag
cgcaagctgaaggagctccagggggactttgacgtgctgtgtcgctcccctggcacgccc
ctgcttagaagctatggagacctggaccagctccctctaccaaagctccactccatccag
agccagctgcgcactgacctagaccttatagacggggtaatatatcagcttcagtcaaag
aaatgtatagtttgccaaacgcatgatcgttgcatagtcctgcagccttgccaacattat
gtactttgtaagaactgtgcacctagtaaatcagaatgtccatactgtaagacaaaaata
ttgaagtggtga
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