Coregonus clupeaformis (lake whitefish): 121569161
Help
Entry
121569161 CDS
T08357
Symbol
pdcd6
Name
(RefSeq) programmed cell death protein 6 isoform X1
KO
K23902
programmed cell death protein 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cclu02044
]
121569161 (pdcd6)
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121569161 (pdcd6)
Secretion system [BR:
cclu02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
121569161 (pdcd6)
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
EF-hand domain-containing proteins
Other EF-hand domain-containing proteins
121569161 (pdcd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
XS
DUF5580_M
Motif
Other DBs
NCBI-GeneID:
121569161
NCBI-ProteinID:
XP_041735776
LinkDB
All DBs
Position
7:39145240..39153918
Genome browser
AA seq
193 aa
AA seq
DB search
MAYHTGSPYRGQPQQQQYNSAAPAPDQGFLWNIFQRVDKDKSCVISDTELQQALSNGTWT
PFNPVTVRSIISMFDRENKGGVNFNEFAGVWKYITDWQNIFRTYDRDNSGFIDKNELKQA
LTGFGYRLSDQFYNTLIEKFDRQRKGQVAFDDFIQCCIVLQRLTDVFRRYDTDQDGWIQV
SYEQYLSMVFNVV
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atggcatatcatacaggtagtccgtatagaggccaacctcaacaacaacaatacaacagc
gcagcgccggcgccggatcaaggttttctttggaatatatttcagagagtggacaaggac
aagagctgcgtgatatcagacacagagctccagcaggccttatcgaacggtacatggaca
cctttcaacccagtgactgtccgatcaatcatatccatgttcgacagggagaacaaagga
ggggtgaacttcaacgagttcgccggagtgtggaaatacatcacggactggcagaacatc
ttccgcacctacgatagagacaactcgggcttcatcgacaagaacgagcttaagcaggca
ctgactggattcgggtatcgcctctcagaccagttctacaatactctcatagagaagttt
gacaggcagaggaagggacaagtggccttcgatgacttcatccagtgttgtattgttcta
cagaggttgaccgacgtgttcaggaggtacgacacagaccaagacggctggatccaggtg
tcctatgaacagtatctatccatggttttcaatgttgtatag
DBGET
integrated database retrieval system
