Coregonus clupeaformis (lake whitefish): 121569221
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Entry
121569221 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: ras-responsive element-binding protein 1
KO
K20210
ras-responsive element-binding protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121569221
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121569221
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-H2C2_5
zf-C2H2_6
zf-Di19
zf-C2H2_3rep
zf-C2H2_jaz
zf-C2H2_8
zf-C2H2_11
zf-C2H2_REST
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
121569221
NCBI-ProteinID:
XP_041735944
LinkDB
All DBs
Position
7:42552706..42579496
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AA seq
1831 aa
AA seq
DB search
MESATEDKRPGGGVSAELSAGETEHSEGQDTPDSTHTQDEHTGSNGALEEGEEEEEEEDE
NGENMTEEGVDLSSINAMISTVMNAGQLNGAMEPSSAPASTPSIPISKTTPPRPPSFNRN
ARRNTETKDVNTDFICPLCEKDCMTQHQLTMHIRQHNSDNGATDHSCSICGKALSSASSL
DRHMLVHSGERPYKCSFCGQTFTTNGNMHRHMKIHDKDPAGVVPISPPSPTKRRRPSAKR
RSAMDEDMERGDEPPNKKVLEESVLEELGSGQGDDEVLPCPICFKTFGCKYDLEVHMDTH
PDTTLRCDLCCLSFRTHRGLLRHNAGIHKKLPTDSGGRPFIQTNPSIPSGFNDLAFIDFS
CRKFSHIAQVWCETNLRRCTSKFHRFVCEACDKAFPLRSALDLHKTTIHQQEPPSPVGGG
QETPVVQEKPTTPTPQQASFLESLGLQHISQVKPQPSEDEVRQAQLDSIRVIQVEPPDST
LPQEAASTAAGFLGGLGLVPASSLQGLSQREALSLLSLQPFPTGFLFQPDGDTAVKPVCG
EHGLIKLADIQQILKVASAVPGQMGLLPPLAKAPHWGVSGQGQAALQAHAPLKPKPMVAP
RSSLAASTPPPLQNTQQASLGCISPSLPPPPSQLLKMPRESSSSSSSSSSSGSQASLEKM
QMEADCMGDAHMPNDLTELQIKQEEGQAAGGKKGAGGANRGGAKASYPCRFCDQVFAFSG
VLQAHMRFHLGILPHQCNICDYVAPDKATLIRHLRTHSGERPYVCRVCHYPFTVKANCER
HLRKKHMKNTRKDIEKNIKYVSSTTTQDPLELAAAGDTACRFCGEDLKSYRALQIHLRTH
NGCQRKPFECRRCGAAFLAKRNCIHHMLKQHPEVQEREIEEHIATLLPAITATTSRASPS
SPLALNGLTPTPTATLKPVKVEDLSIYSSSGDLDQPLDFSNKSRGGSGTSSTAGSLTGSP
GIKLETVSPAAYDCSMEPIDLSIPKNPSKSLKRDTIAVAPVSVERREIKKELPFPSVLDH
LALPQALQLDKSTEEKLTTPQSGSYQLPPVIPSPLPIGTPTATGRALRLKPLLPKPAFTS
SSSSLKELPPLASIAQIISSVSGAPDLLKREPDNKAPAALNGLQTVPERPAGGDNSSEAS
MEELLEGSSRKRTRKKQVSQAKTMAPARVPTPEQNTGSGLDLESSGEFASVEKMLATTDA
NKFSTYLQTGAAELGRRDEGRQSPGEEKEEKESPPQSVPPQSKGGKKNAYSNSVQKMTCP
FCPRVFPWASSLQRHMLTHTGQKPFPCPKCDAFFSTKSNCERHLLRKHGVTNRSLRRNGQ
VSKNGDEGSHDSAESSENEQTAGEVLDLSSMDPDQKGDAYGSSSADQTPDTAEQLLGEME
PQPSNNNNNVENEDYDDNDSQSNKSLDLNFASKLIDFKFLSEGEQPQTSLGGESVVVAEP
ERVTDVQQQQQDQESSKYTCKSCKKNFRYAATLARHEKAHLCESAPPEEACGTEGTRPGT
EELPNATTATAEEEDQEEEEEEGEKEAPESEGAGSVMDSGSEEEEKEKEERSDEEGGLAE
PKNGEGEVGRGSGSKADKRKKICNVCSKRFWSLQDLTRHMRSHTGERPYKCQTCERTFTL
KHSLVRHQRIHLKPRGSDGADANGAEAPAGDSASEEGECTPTSTCPPSENESEGTGAARE
EGAEKEAPLPGSTSPDQSLSTTEPAQSESATEAVAELLTEPASEPVSEPVLEPVPDPSVE
QASDSVSEIAVELSAAESASETASNAATQPVTETPKESSTEAPTPQPSAVTPELDSKGPS
EGFIQGLLEIHTKPSLEYILPAGEARLVGVE
NT seq
5496 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgccacagaggacaagcgtccggggggaggggtgagcgccgagctgagcgct
ggagagactgagcactctgaggggcaggacacccccgactccacacacacacaggacgag
cacacagggagtaacggagctttggaggaaggagaggaggaggaggaggaggaagatgaa
aatggagagaatatgacagaggagggcgtggacttgtcatccatcaatgccatgatatcg
acggtgatgaacgcgggccagctcaacggagccatggagccctcctcagcccctgcctca
acaccgtccatccccatcagcaagaccaccccacccagaccccctagtttcaatcgcaat
gccaggagaaacacggaaaccaaagacgtcaatacagatttcatctgtcccctgtgtgag
aaagactgtatgacccagcaccagctcactatgcacatccgacagcacaactcggacaat
ggggcgacggaccactcatgcagcatctgtggcaaggccctgagctcagccagctcgctg
gaccgccacatgctagtgcacagcggagagaggccttacaagtgctccttctgcggccag
accttcaccaccaatggcaacatgcacagacatatgaagatccacgacaaagacccggcc
ggtgtcgttcctattagccccccctcgcccaccaagagacgacgcccgtccgccaagagg
aggtcggctatggacgaggacatggagcgaggtgacgaaccgcccaacaaaaaggtgcta
gaggagagtgtgttggaggaactgggttcaggccagggggatgatgaggtgttgccgtgc
cctatctgcttcaagacctttggctgcaagtacgacctggaagtccacatggacacacac
cccgacaccactctcaggtgtgacctgtgctgcctctcctttcggacccaccgcggcctg
ctgcggcacaacgccggcatccacaagaagctgcccacggactcaggcggacggcccttc
atccagaccaacccctccatcccctctggcttcaacgacctggcctttatcgacttctcc
tgccgcaagttttcccacatcgcccaggtctggtgtgagaccaatctccgccggtgcacc
agcaagttccaccgctttgtgtgcgaggcctgcgacaaggccttccccctgcgctcggcc
ctagacctgcacaagaccaccattcatcagcaggaaccgccatcgcccgtagggggcggc
caagagacccctgtggtacaggagaagccgacaaccccgacccctcagcaggccagcttc
ctagagtccctgggtctgcagcacatttcccaggtcaagcctcagccttctgaggatgag
gtccgtcaagcccagctggacagtatccgggtcatccaggtggagcctccggactccact
ctgccccaggaggcggcttccacagctgctggctttctgggcggcctgggcttggtgcct
gcctcgtctctgcaggggctgtcccagagggaggctctcagcctgctctccctgcagccc
ttccccacaggcttcctcttccagccagacggtgacactgctgtcaagcctgtgtgtggc
gagcatggcctgattaagctggctgacatccagcagatcctgaaggtggcctcggccgtc
cctggtcagatgggcctcctgccgcccctggccaaggctccccactggggagtgtccggc
cagggtcaggcggccctgcaagcccatgccccactgaagccaaagcccatggtggcacca
cgctccagcctggctgcctccacgccgccgccactccagaacacccagcaggcctccctg
ggctgcatcagccccagcctgcccccgccgcccagccagctgctcaagatgcccagagag
tcttcatcatcgtcatcgtcctcctcttcctcgggcagccaggcctccctggagaagatg
cagatggaggcggactgcatgggcgacgcccacatgcccaacgacttgacggagctgcag
atcaaacaagaggagggccaggcggccgggggaaagaagggggcagggggggccaaccgc
gggggtgctaaggcatcctacccctgccgcttctgtgaccaggtgtttgccttctccggg
gtgctacaggcgcacatgcgcttccacctgggcatcctgccgcaccagtgcaacatctgt
gactacgtggcgcctgacaaggccactctcatccgccacctgcgcacgcacagcggcgag
cgcccctatgtgtgccgcgtctgccactaccctttcaccgtcaaggcgaactgcgagcgc
cacctgcgcaagaagcatatgaaaaacacacggaaagatattgagaagaacatcaagtac
gtctcgtcaaccaccacccaggatcctttggagctggctgctgccggcgacaccgcctgc
cgcttttgcggtgaggatctaaagagctaccgggctctccagatccacctgcgcacccac
aacggctgccagcgcaaaccctttgagtgccggcgctgcggggcggctttcctggccaag
aggaactgcatccaccacatgctcaagcagcaccctgaggtgcaggagcgggagatcgag
gagcacatcgccacccttctccccgccatcacagccaccacttccagggccagccccagc
agccctctggctctcaacggcctcacgcccacccccactgccaccctgaagccagtcaag
gtggaggatctcagcatctactcctcctctggtgacctggatcagcccttggacttctcc
aacaagagccgggggggaagcgggaccagcagcactgcggggagcctgaccgggtctcct
gggatcaaactggagacggtcagcccggcagcctacgactgctccatggaacctattgac
ctgtccatccctaagaaccccagcaagagtctgaagagagacaccatcgctgttgccccg
gtgagcgtggagcgccgagagatcaaaaaggagctgcccttccccagcgtactggaccac
ctcgccttaccccaggctcttcagctggacaagagcactgaggagaagctgacgaccccc
cagtctggctcttaccagctccccccagtgatcccctccccgctccctattggcaccccc
accgccacaggccgggcgctccgtctcaagcccctgctgcccaaaccagcctttacctcc
tcttcctcctctctgaaagagcttccccctttggcttccatcgcccagatcatctcctcc
gtctcaggggctccagacctgctcaagagggagccagataacaaggctcctgctgccctc
aacggcctccagacagtaccggagcgtccagctgggggcgacaacagctcagaagcgtcg
atggaagagctcctagagggctcgtccagaaagcgcactagaaagaagcaagtgagccag
gccaagactatggcacctgcccgtgtgcccacgcccgagcagaacaccggtagcggcttg
gacctggagtccagcggcgagtttgccagcgtggagaagatgcttgccaccaccgacgct
aacaagttcagcacctacctgcagacgggggcggcggagctgggaaggagggacgagggg
agacagagcccgggagaggagaaggaggagaaagagtcacctcctcagtctgtgccaccc
cagtccaaaggagggaagaagaatgcctactccaactcagtgcagaagatgacctgtccc
ttctgcccccgagtcttcccctgggccagctccctgcagagacacatgctcacacacaca
ggtcagaagcccttcccctgtcccaaatgtgacgccttcttctccaccaagtccaactgt
gagcgccacctgctgcgcaagcacggcgtgaccaaccgctcgctgcgccgcaacggccaa
gtgtccaagaatggcgacgagggttcacacgacagcgcagagagttccgagaatgagcaa
actgcaggagaggttttggacctgagcagcatggaccccgatcagaaaggcgacgcatac
gggtcgtccagtgcagaccaaacaccagacactgctgagcagctgctaggggagatggaa
ccgcaacctagcaacaacaacaacaatgttgaaaatgaagactatgacgacaatgattca
cagagcaacaagagcttggacctcaacttcgccagcaagctcatcgacttcaagttcttg
tcggaaggcgagcagccccagacctccctgggcggagagagtgtggtggtggccgagccg
gagagggtgacggacgtccagcagcagcagcaggaccaagagtcctccaagtacacctgc
aagagctgcaagaagaacttccgctacgccgccaccctggctcgccatgagaaggcacac
ctgtgtgagagtgcacccccagaggaggcttgtggaactgaggggaccaggccaggcaca
gaggagctccccaatgctactacagccactgccgaggaggaggatcaggaggaggaggag
gaggagggagagaaggaggctccggaaagcgagggagcgggaagtgtgatggacagcggc
tcggaggaggaggagaaagagaaggaggagaggagcgatgaggaggggggcttggcagaa
ccaaagaacggagaaggagaggtgggcagagggtcgggaagcaaagcggacaagaggaag
aaaatctgtaacgtctgcagcaaacgcttctggtcactgcaggatctgacgagacacatg
cgctcgcacacaggtgagagaccctacaagtgccagacgtgcgagcgcaccttcaccctg
aagcacagcctggtgaggcaccagcggatccacctgaagccgcggggcagcgatggagct
gatgccaacggggcagaggccccggccggagactcagctagcgaggagggagagtgcacc
ccaaccagcacctgccccccttcagagaacgagagcgagggcaccggagcggccagggag
gagggagctgagaaagaggcccctctaccaggctccacatctccggaccagtctctgtcc
accactgaaccagcccagtcagagtcagctacggaggccgtggctgagctgctcactgag
ccagcctcggaaccagtctcggaaccagtcttggaacctgttccggacccatctgtagaa
caagcctcggacagcgtctctgaaatagctgtagaactctctgctgcagaatcagcctct
gaaacagctagtaatgcagccacacaaccagtaacagaaacccccaaagaatcctccaca
gaggcccccaccccacagccctctgctgtaaccccagagttagactcgaagggcccatcg
gaaggcttcatccaaggcctactggagatccacaccaagccttccctggagtacatccta
cctgccggcgaggctcgcttggtgggcgtggagtga
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integrated database retrieval system
