Coregonus clupeaformis (lake whitefish): 121569250
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Entry
121569250 CDS
T08357
Name
(RefSeq) uncharacterized protein LOC121569250 isoform X2
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
121569250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121569250
Membrane trafficking [BR:
cclu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
121569250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_9
SH3_2
PH_5
Motif
Other DBs
NCBI-GeneID:
121569250
NCBI-ProteinID:
XP_041735988
LinkDB
All DBs
Position
7:complement(23021106..23053448)
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AA seq
1311 aa
AA seq
DB search
MRRAGQSDGAPSTSDDSLSCRHGSSADPDLQPLARPRPPGDLYPIQGNVEGATPPSLLSG
CGAQVQPVTSDPHSEESRLNGLNMAAWSSPVISHPEIKPYPSRIMRLFSTQRKFTVPGDS
PGPTRPLSFQGPPSSAGGPQALPGLSGLAVMGSFKKLRSSVLQGIQNRGTANPDGEYISV
ANHGGDNGMVTTNQSLRLRCGEGYRVSNGVGMSPYGSDNEKEEEEVVDEEDGLQRNTRFS
RSIRRAYGAGRISLLVTGQNQNGERGEAPEQGVSTNQRPVFGSGSGSEVNLHSEESVNVN
VLSRLSKSADNLHLFKTPFRRKAPSPSPSPINSPGTDGSVGANGGPSIQRSASASSVDLR
DRSQSPGRLRSPLGAKGHMLKLVGSMTDLTVRRRPNPSPVTSSGSPVTPLSPLSRLHDDY
SRRTPCLPASDRQRRPSPARTRNVTPVSLEHTPTVHPQEGPDHVSFPTYSEPLATTSSPL
RSSLCEGGRSQEGRGDEWRAQCDSAPLPQGEPYESHSKHKPEVNAEVKTEPKQCIWTRPA
QDQEEQEGTSDEQGREALLKGEEKPSPSATGTPLTQTCSLDSPTSPMSPTSSTATGATET
STSVTPRRRAGRSRPRPISDYAQLVARKYAIPEEEVELHPEERTTNGTPCQDFKSNGGSQ
DRDSPENYNMNGDLQCRRRRPMSVIGGVDLYSSAGPEEREDRLPSPLSRPPVPSHQVPSY
RAVSARFRPSTFSQSTPIGLDRLGRRKLHRVLSDGGSECCAAVNGDSVSEEEGSFDELSD
VTTYLQPGVGLSALSQWISQGQAVYAEALWDHVTMEEQELAFKAGDVIRVLEAPHKDWWW
GMGADREAWFPSSFVRVRVNQEEDSGAESVGSCALDQEDPHTAPRDTHSAEHRDQMRTNV
VKEIMNTERIYIKHLRDICEGYIRQCRKNPGMFTELQLKTIFSNIEDIYKFQRQFLKDLE
KKYNTDQPHLSEIGACFLSQGEGFSIYSEYCNTHPAACGELQRLMKLGRYKHFFEACRLL
QQMIDISIAGFLLTPVQKICKYPLQLRELLKYTPKDHSDYGRVSDAYEAMKNVASLINEG
KRRLESVDAIAHWQVAILHWEGADVLERSSELIHSGELTRITWQGNKTQQRSFFLFDHQL
VFCKKDVLRRDLLHYRGRLDMDHTEVLEMPDGRDPELGISLKNALRLRNSSTLETLCYLC
CRKPKDRQRWLQAFARERLRVQEDQEMGMKISETQRKQAIFNARKSKQGKMKTIGYSGTV
PPHHQPLHPIHQRHVTVPTSVPQQQVFTLAEPKQKPAHLWYTFTRHAFFRK
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atgagaagggcggggcagagcgatggagccccgtccaccagcgatgactccctctcttgc
cgccatggctcctctgccgaccctgaccttcaacctctagcccggccccgaccccctggc
gacctttaccctatccagggtaatgtggagggggcgacgcccccgtccctgctgtctggg
tgtggtgcccaggtacagccggtgacctctgacccccacagtgaggagagtagactgaac
gggctcaacatggccgcctggtccagccctgtgataagccaccctgagataaagccctac
ccctccaggatcatgaggctcttctctacccagaggaagttcaccgttcctggggacagt
ccgggccctaccaggcccctctccttccagggccctccatccagtgccgggggcccgcag
gctttgccaggtctgtcagggctggccgtcatgggctcctttaagaagctgcgctcctca
gtgctccaaggcatccagaaccgagggacagccaatccggatggagagtacatctcagta
gccaaccatggtggagataatggaatggtcacaaccaatcagagcctaagactaaggtgt
ggggagggctatagagtgtccaatggggttgggatgagcccttatggttctgacaatgaa
aaagaggaggaggaggtagtagatgaggaagatggactgcagagaaacacacgcttctct
aggagtattcggagagcgtatggggcggggcgcatctcactgctggtcaccgggcagaac
cagaacggggaacgaggggaggctccagaacagggggtttcaaccaatcagaggccagtt
tttggctccggttcagggtcagaggtgaacctccattcggaggagagtgtgaatgtcaac
gtgctgagcagactgagcaagagcgcagacaacctacacctctttaagacccctttcaga
cgcaaagccccttctccctctccctctccgataaactcaccaggtaccgatggctctgta
ggggccaatgggggccccagcatacagagatcagccagtgcctcgtccgtggaccttagg
gaccgcagccagagccctggacgccttaggagtcccctaggggccaagggccacatgttg
aagctagtgggcagcatgactgacctgaccgtgagacgcaggcctaacccgtcccccgtc
acttcctcaggctcccccgtgactcccctgtcccccctcagccgtctccacgacgactac
tcccgccgcacgccctgccttcccgccagcgaccgtcaacggcggccctcgcccgccagg
accaggaacgtcactccggtatcactggaacacacgccaaccgtccacccccaggaagga
ccagaccatgtcagtttcccaacctatagtgaacctctcgctacaacctcatctcccctg
aggagcagcctgtgtgaggggggcaggtctcaggagggacggggagacgagtggagagca
cagtgtgactccgctccactcccccagggggagccctatgagagccacagcaaacacaag
ccggaggtcaacgcagaggtcaagacggaaccaaagcagtgcatatggaccagaccagcc
caagatcaggaggagcaggagggcacgtcagacgaacagggcagagaggcactattaaag
ggtgaagagaagccctctccttcagccaccggtacccctctcacccaaacatgttcccta
gactctcccacatcacccatgtcacctacatcatccacggcaacaggcgcaacggaaaca
tccacgtccgtcacccccaggcggagggcgggccgatcgaggcctcggccaatctctgac
tacgctcagctggttgccaggaagtacgccatccccgaggaggaggtggagctacatcct
gaggagaggactacaaatggaactccctgtcaggacttcaaaagtaatggaggctcgcag
gacagagacagcccagagaattacaatatgaatggagatctccagtgccggaggagacgg
cccatgtctgtgattggaggagtggatctgtactcttcagctggacctgaggagagagag
gaccgcctgccctctcccctctcacgcccccctgtcccgtcccaccaggtgccctcctac
agggcggtgtcggccaggtttcgcccctccaccttctcccagagcacccccatcggactg
gaccgcctcggacgacgcaaactacacagagtcctcagtgacggaggctcagagtgttgt
gcagcggtgaatggtgacagtgtgagtgaggaggaggggagcttcgatgagctcagtgat
gtcacaacgtacctgcagcctggggtggggctgtctgctctcagccagtggatcagccag
ggtcaagcagtgtatgcagaggccctgtgggaccatgtgacaatggaggagcaggagctg
gcgttcaaggcaggggatgtgatccgggtgctggaggcccctcacaaggactggtggtgg
ggcatgggggcagacagggaggcctggttcccttccagcttcgtcagggtgcgtgtgaat
caggaggaggactctggagcggagagtgtagggagttgtgctctggaccaggaggaccca
cacactgccccccgggacacacacagcgccgagcaccgagaccagatgaggaccaatgtg
gtcaaagagatcatgaacacggaacgcatctacatcaaacacctccgggacatctgtgag
ggctatatccgtcagtgtcgtaaaaacccgggcatgttcactgagctgcagctgaagacc
attttcagtaacatcgaggacatctataagttccagagacagttcctcaaagacctggag
aagaagtacaacacagaccagcctcacctcagtgagataggagcctgtttcctctcacag
ggggagggtttctccatctactctgagtactgtaacacccaccctgcagcgtgtggggag
ctgcagcgcctcatgaagctgggcaggtacaagcacttctttgaggcctgccggctgctg
cagcagatgattgacatctccatcgctggcttcctgctcacgcccgtccagaagatctgc
aagtaccccctgcagctgagagagctgctcaaatacacccccaaagaccacagtgactac
ggtagagtgagtgatgcgtacgaggcgatgaagaacgtggcgagcctcatcaatgagggg
aagaggcggctggagagtgttgacgccatcgctcactggcaggtggccatcctacactgg
gagggagcagacgtgttggagcgcagctcggagctgatccactctggagagctgacccgg
atcacctggcagggcaacaagacacagcagcgcagcttcttcctgtttgaccaccagctg
gtgttctgtaagaaggacgtactgcgccgcgacctgctgcactaccgcggccgcctggac
atggaccacacggaggtcctggagatgcccgacggcagggaccctgagctgggcatctcg
ctgaagaacgccctgcggctccgcaacagctccaccctggagaccctgtgttacctctgc
tgcagaaagcccaaggacagacaacgctggctgcaggccttcgccagggagagactgaga
gtacaggaggaccaagagatgggaatgaagatcagtgaaacgcagcgaaaacaagcaatc
ttcaatgcaaggaaatccaaacaagggaaaatgaagaccattggctactctggcactgtc
ccgccacaccaccagcccctgcatccaattcaccagcgccacgttaccgtgccaaccagc
gtgcctcagcagcaggtgttcacattggccgagcccaagcaaaagcccgcccacctgtgg
tacaccttcacccgacacgccttcttcaggaaatga
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