Coregonus clupeaformis (lake whitefish): 121569258
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Entry
121569258 CDS
T08357
Name
(RefSeq) transcription factor IIIA
KO
K09191
general transcription factor IIIA
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121569258
03021 Transcription machinery [BR:
cclu03021
]
121569258
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121569258
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
121569258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
TFIIIA_zf-C2H2
zf-C2H2_4
DUF7565
zf-C2H2_8
zf-C2H2_jaz
zf-C2HC_2
Zap1_zf1
zf-C2H2_ZN142
zf-AN1
Ogr_Delta
zf-C2H2_ZNF462_1st
zf-C2H2_6
zf-C2H2_11
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
121569258
NCBI-ProteinID:
XP_041735999
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All DBs
Position
7:22839945..22843115
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AA seq
323 aa
AA seq
DB search
MGERIQVQKSFICSFVNCNATFNKSWKLDAHLCKHTGLKPFSCENCDKSFCTRYQLTRHG
LSHSGEKPYTCLAAGCSEAFVTHASMKNHMARVHQHQEKHYKCDHVDCGMEFKKKNKLNI
HKIIHTQLLPFQCNFEGCKREFAAPGQLKRHEKVHKGYPCAVEGCPFQGKTWSEYQKHRK
AVHRVKLQCDSCSRMFLEAWFLKQHQLRVHSGAPKRVFQCSEAGCGKTFTTHFNLENHVV
SDHEGKKPFSCTHAGCGKSFAMQESLRRHRVGHDPEKKKLQKVRPKKSKPSRQKTELATA
STQAETSRLADKLHNTSLGNSTP
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgggggaaaggatacaagtacaaaaaagctttatttgttcttttgtcaactgcaatgcc
acctttaataaatcatggaagttagatgcccatctttgcaaacacacaggtttgaaaccc
ttctcgtgtgagaactgtgacaagagcttctgtacccgctaccagctcaccagacatggg
ctgagccacagtggagagaagccatacacgtgtctggctgcaggatgctccgaggccttc
gtcacacatgccagcatgaagaaccacatggctcgtgttcaccagcaccaggagaagcac
tataagtgtgaccacgtggactgtgggatggagttcaagaagaaaaacaaactcaatata
cacaagattatacacacacaactgctgccctttcagtgcaactttgagggctgtaagaga
gaatttgctgctcccggacaactaaagcgccatgagaaggtgcacaaaggttacccctgt
gctgtggagggctgtccattccaggggaagacttggtcagaatatcagaagcacaggaag
gctgtgcacagagtcaagctgcagtgcgatagctgcagtaggatgttcctggaggcatgg
ttcttgaagcagcatcagctgcgggttcactccggtgcgcccaagagggtgttccagtgc
tccgaagctgggtgtgggaagactttcaccacacacttcaacctggagaaccatgtcgtg
tcagaccacgagggcaagaagcccttctcctgtacccacgcaggctgtggcaagagcttc
gctatgcaggagagtttgagacgacaccgagtgggtcatgacccagagaagaaaaagctg
cagaaggtacgccctaaaaagagcaagccgtcgcgtcagaagactgagttggcgacagca
tccacacaggctgagaccagcagactggctgacaaactccataacaccagcttgggcaac
tctacgccataa
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