Coregonus clupeaformis (lake whitefish): 121569263
Help
Entry
121569263 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase RNF12-A-like
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121569263
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121569263
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121569263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_4
zf-RING-like
zf-P11
Prok-RING_4
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
121569263
NCBI-ProteinID:
XP_045077179
LinkDB
All DBs
Position
7:complement(22729144..22735359)
Genome browser
AA seq
734 aa
AA seq
DB search
MVMDPPGGRDERRRQAERLRREEAYYHFINDLSEEEYRLMRDSNLLGTPGEVTAEELRQR
LDGAKERVSSQPRPEPHPQNTEAGEEEGSSGTAETGAETSNGDSLLEWLNTFRRTGNATR
SGQSGNQTWRAVSRTNPNSGEFRFSLEININHEQPEPGEHSDTPDPSELAPVPPPSTASI
HTSPSTRPSPYTPARPSPYTPTRPSPYPSPRATLGRRAQTRRTRSTTTTPPLTPAPFTSP
LTPPTALRSTTALHLPPAPFPITPPTLQDQSSPLQLQSPSGASSPGERQEEGVPTLDCPR
VPTQSGPQGASVGHEPRRSRTRSRGRIRRAAAGGGTSSRSSRRRSRSPLQRNPAPNSATL
SPSGGSGNSGSIDGHTAEPGNGTASVSMETGEALSEPAVVAEAGPEAGEQEGEAHTAGAG
GAGGVRRHPTIMLDLQVRRIRPGENRDRDSIASRTRSRARAAENTVTFESDSGGFRRTIS
RSERAGIRTYVSTIRIPLRRISETGLGEPSSTALRSILRQIMTGFGELSSLMETEADSES
TGGTPGHQDPAGPNANANTNTTQAYHSHGNESGTGAEGQAGGAEMEREGAAGAEEEGRGQ
ERLAGSDGGAGGVPTPNEGRPTSRDTNNLVENGTLPILRLAHFFLLNDEEDEEHPRGLTK
EQIDNLATRTYGQASLEGEAGRACSVCINEYAQGNKLRRLPCAHEFHIHCIDRWLSENNT
CPICRQPILPVHQD
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggaccctcccggtgggcgagacgagcggcgtcgtcaggcggagcgtcttcga
cgggaggaggcgtactatcacttcatcaatgatctgagcgaggaagagtaccgcctcatg
agagacagcaacctgctgggcacacctggtgaagtgacagcggaggagctacggcagcgc
ctggacggggcaaaggagcgtgtgtcatctcagccccgccctgaaccacacccacagaac
acggaggctggagaggaggaggggagcagcggtactgctgagacgggagcagagacatct
aacggcgactcactgctggagtggctgaacacgttccgacgcaccgggaacgccacgcgc
agcggccagagcggcaaccagacgtggcgcgcggtcagccgcaccaaccccaacagcgga
gagttccgcttcagcctggagatcaacatcaaccatgagcagccggaaccaggggagcac
agtgacacccccgacccctcagagttggcccctgtcccccctccatccacagcctccata
cacacttccccctccactcgcccctccccctacacccctgcccggccctccccctacact
cctacccggccctccccctatccctcacctcgagctaccctgggcaggagggctcagacc
cgccgtacacgcagtactaccaccaccccccctctgactcctgcacccttcacatcaccc
ctgaccccccctactgctttaagaagtacaacagccctccacctccccccagccccattc
cccataaccccccctacccttcaggatcaaagcagccctctacagctccaatccccaagc
ggagcttcctccccaggtgagaggcaggaggagggggttcctaccctggactgcccccgt
gtaccaacccagtctggcccccagggggcgtctgtgggtcatgagccacgcagaagcagg
actcgatcccgcggccggatccgcagggctgcagcaggaggtgggacttcctcccggtcg
tctaggagacgtagccgctcccctcttcagagaaaccctgcccctaactcagctaccttg
tcccctagtggtgggagtggaaatagtggctctattgatggccacactgccgagcccggc
aacggaactgcttctgtctccatggagaccggtgaggccttgtcagagccggctgtagta
gcagaggctggtccagaggcaggggagcaggagggagaggcacacacggccggggcgggg
ggtgcaggaggggtgcggcgccatcctaccatcatgctggacctgcaggtgcgtcgcatc
cgaccgggagagaaccgggaccgggacagcatcgccagccgtacccgctcccgggcccgc
gccgccgagaacactgtcaccttcgagagtgacagcggaggcttccggcgcaccatctcc
cgctcggagcgggccgggatccggacctacgtcagcaccatccggatccctctgaggagg
atcagtgagacgggcctgggggagcccagctccaccgccctgcgctccatcctcagacag
atcatgactggcttcggagagctcagctccctcatggaaacagaggctgactctgagtcc
actgggggcacgccaggtcaccaggaccctgcaggacccaacgctaacgctaacaccaac
accacacaggcctaccatagccacggcaacgagagtggaactggggcggaaggccaggca
ggaggggcggagatggagagagagggagcagcaggggccgaggaggaaggaagaggccag
gagaggttagccgggagtgacggcggcgccgggggagtccccacccccaacgagggtcgg
ccgacgagcagagacacgaacaacctggtggagaatggcacactgcccatcctgcggttg
gcacacttcttcctgctcaacgacgaggaagacgaggaacaccctcgcggcctgaccaaa
gagcagatcgacaatctggccacacgcacctacggccaggccagcctggagggggaggcg
gggcgcgcctgcagcgtctgtatcaacgagtacgcccaggggaacaagctgcgccgcctg
ccctgcgcccacgagttccacatccactgcatcgaccgctggctctctgaaaacaacacc
tgccccatctgcaggcagcccatcctccccgtgcaccaggactga
DBGET
integrated database retrieval system
