Coregonus clupeaformis (lake whitefish): 121569308
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Entry
121569308 CDS
T08357
Name
(RefSeq) suppressor of cytokine signaling 5-like
KO
K04698
suppressor of cytokine signaling 5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121569308
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
121569308
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GFIT
Motif
Pfam:
SOCS
SOCS_box
SH2
Motif
Other DBs
NCBI-GeneID:
121569308
NCBI-ProteinID:
XP_041736093
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Position
1:45958542..45980104
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AA seq
567 aa
AA seq
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MEKVGRMWSNLRSRCQTLFHSDGAGPSTENSVVEVDSMHCVVDLGRGGTSGEAQASRASS
LSRSLLPLPMVTGGRRHNCVSDIPQIVERTIDRKDSEEARGVPGGVPMARRDSYSRHAPW
GGKKKHSCSTKTQSSMDTDRRSGCTHRAAGQRERRYGVSSIQEMDDSGDGGRSLSVRSLR
QRLSDTVGLCLPLPPRRRSLSSQTPTISKRKIHLTELMLETCPFPQGSDLANKWHLIKQH
TAPISPHSSTALLDAFDPAHPSPEDEEERLRERRRLSIEEGVDPPPNAQIHTLEALAQCS
SLYKLGPKMAPGIAEASGEARGTTASCSGGVAGSLGSSVQVLGGATAQLADCDSEEDSTT
LCLQARRPKQRHASGDGHLNRNQPGPWKVHTQIDYIHCLVPDLLQITALPCYWGVMDRYE
AEALLDGRPEGTFLLRDSAQEDYLFSVSFRRYNRSLHARIEQWNHNFSFDAHDPCVFHSS
TVTGLLEHYKDPSACMFFEPLLTAQLHRTFPFGLQHLARAAICRQTTYDGIGALPLPPAL
QDFLKEYHYKQKVRVRWLEREPPLKVK
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagtgggcaggatgtggagcaacctgaggagccgatgccagaccctcttccac
agcgacggcgcgggacccagtacagagaacagcgtggtggaggtggacagtatgcactgt
gtggtggacctgggacggggaggcacttcaggcgaggcccaggcatctcgggcctccagc
ctgtcccgaagcctcttgccgcttcccatggttactggaggacgacgtcacaactgtgtg
tcggacatcccccagatagtagagagaaccatagacagaaaagacagtgaggaagcgagg
ggggttcctgggggagtccctatggcccggagagactcgtactcgcgccatgcaccttgg
gggggcaagaaaaaacactcatgttctactaagacccagagctccatggatacagacagg
cggtcgggatgcacacacagggccgctgggcaaagggagcgtcgctacggggtcagctcc
atccaggagatggatgactctggagacggggggcgcagtctgagcgtccgctccctgcgc
cagcggcttagcgacacagtgggcctgtgtctccccctgcccccccgccgccgctcgctc
tcctcccaaaccccaaccatctccaagcgcaagatccacctcacagagctgatgctggag
acctgtcccttcccacagggctcggacctggccaacaagtggcacctgattaagcagcac
acagcgcccatcagcccgcattcctccacggctctgctagacgcctttgacccggcccac
ccctcccccgaggacgaggaggagcgtctgcgcgaacgtcgcaggctcagcattgaggag
ggagtggaccccccacccaacgcccagatccacaccttggaggccttggcgcagtgctcc
tctctgtacaaactgggaccaaagatggcccccggcattgcagaggcctctggggaggcc
cggggcacaacggccagctgctcaggaggggtggctgggtcgttgggctcgtcggtgcag
gtgctcggaggggctacagcccagctggctgactgcgactcggaggaggactccaccacc
ctctgcctgcaggcccggaggcctaagcagcggcacgcgtccggggatggccatctgaac
cggaaccagcctgggccctggaaggtgcacacccagatcgactacatccactgcctggtg
ccggacctgctacagatcactgcgctgccctgctactggggcgtgatggaccgctacgag
gcagaggcgctgctggacggccggcccgagggcaccttcctgttgcgcgactcggcccag
gaggactacctgttctcggtcagcttccgtcgctacaaccgctcgctgcacgcccgcatc
gagcagtggaaccacaacttcagcttcgacgcccatgacccctgcgtgttccactcatcc
accgtcacgggcctgctggagcactacaaagaccccagcgcctgcatgttctttgagccg
ctgctcacggcgcagctccaccggaccttccccttcggcttgcagcacctggcccgcgcc
gccatctgccgccagaccacgtacgacggcatcggcgccctgccgctgcccccggccctg
caggacttcctcaaggagtatcactacaaacagaaagtgcgcgtgcgctggctggagagg
gagccgccactcaaggtcaaatag
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