Coregonus clupeaformis (lake whitefish): 121569335
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Entry
121569335 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase MARCHF6 isoform X1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121569335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121569335
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121569335
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
121569335
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
FAM165
Motif
Other DBs
NCBI-GeneID:
121569335
NCBI-ProteinID:
XP_041736141
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Position
7
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AA seq
914 aa
AA seq
DB search
MDTADEGDICRVCRSEGTPDKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRF
AFTPIYSPDMPTRLPIQDICAGLLASVGTAIRYWFHYTLVAFAWLGVVPLTACRIYKCLF
TGSVTSLLTLPLDMLSTDNLLADCLQGCFVVTCTLCAFISLVWLREQIVHGGPPLWLEHH
QQPQPNAAGQQPNEAAGQGAADEPPANPPAHEAEPEPPDGPPEQGEEPEQDNEEEEGAAA
EDADANNGAQDDMNWNALEWDRAAEELTWERMLGLDGSLVFLEHVFWVVSLNTLFILVFA
FCPYHIGHFSVMGLGFEEYVQASQFEGLITTIVGYILLAMTLILCHGFAALVRFQRSRRL
LGVCYIVVKVSLLVVVEIGVFPLICGWWLDICSLEMFDASLKDREQSFKSAPGTTMFLHW
LVGMVYVFYFASFILLLREVLRPGVLWFLRNLNDPDFNPVQEMIHLPIYRHLRRFILSVV
VFGSIVLLMLWLPIRMIKLLLPAFLPYNVMLYSDAPVSELSLELLLLQVVLPALLEQGHT
RQWLKGLVRAWTVTAGYLLDLHSYLLGEQEDDEANQPVNNNNNPAPGHHNNNANPAPAVG
EGLHAAHQAILQQGGPIGFQPYHRPLRFPFRIVLLIGFMCVTLLVSSLVCLTLPVFAGRW
LMSFWTGSSKIHELYTAACGLYVCWLSIRGATVLLAWMPQGRTIIMIKVQEWSLMILKTL
VVALLVAGVIPLLLGLLFELVIVAPLRVPLDQTPLLYPWQDWALGVLHAKIIAAITLMGP
QWWLKTVIEQVYANGIRNIDLHFIICKLAAPVISVLLLSLCVPYVIAAGVVPAVGLSGVS
GVTPEMQILIQRRIYPFLLMVVSIIGILSFQIRQFKRLYEHIKNDKYLVGQRLVNYERKA
RGTSSVLPPNSIPE
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggacactgcagacgaaggggatatatgtcgcgtgtgtcgttccgaggggaccccagac
aaacccctgtaccacccctgtgtctgtaccggaagtatcaagttcatccaccaggaatgt
ttggtccagtggctgaagcacagcaggaaggagtactgtgaattatgcaagcacagattt
gctttcacaccaatctactccccagacatgcccacccgcctgcccatccaggacatctgt
gctggcctgctggccagtgtgggcacggccatacgatactggttccactacacactggtg
gccttcgcatggctgggggtggtccccctcactgcatgtcgaatctacaagtgtctgttt
accggctctgtgacctcgctcctgacgctgccattggacatgctctccacagataacctg
ctggcagactgtctgcagggctgtttcgtggtgacgtgtacactgtgtgcgttcattagc
ctggtgtggctcagggagcagatagtccatggtggcccccccctgtggctggagcaccac
cagcagccccagcccaacgcagccggacagcagcccaatgaggctgcaggtcagggagca
gctgatgaaccccctgctaacccgccagctcacgaggcagagccagagcccccagacggc
cccccagaacagggggaggagccagaacaagacaacgaggaagaggagggggcggctgcc
gaagatgcggatgccaacaacggagctcaggatgatatgaactggaatgctctagaatgg
gacagagcagcagaggagctcacctgggagaggatgcttggactagatggctccttggtg
ttcttagagcatgtgttctgggttgtctctctgaacactctcttcattctggtcttcgcg
ttctgtccataccacattggtcacttctctgtcatgggacttggctttgaggaatatgtc
caagcttcccaattcgagggcctgatcacaaccatcgtagggtacatcctgctggccatg
acgctcatcctctgtcacgggttcgctgctctggtcaggtttcagaggtcccgccgtcta
ctaggggtctgctacatcgttgtcaaggtctcactgcttgttgtcgtggagataggagtt
ttccccctcatctgtggctggtggctcgacatctgctctttagagatgtttgatgcgtct
ctgaaggacagagagcagagttttaagtctgctccaggcaccaccatgttcctgcactgg
ctggtgggaatggtctacgtcttctatttcgcatccttcatcctcctgctgagagaggta
ctgaggcctggggtcctgtggtttctgagaaacctgaacgatccagacttcaacccagtc
caggagatgatccacctaccaatctacagacacctccgcaggttcatcctgtctgtggtg
gtgtttggttctatcgttctcctgatgttgtggctgcccatcaggatgatcaagctactc
ctccctgctttccttccctacaacgtcatgctttacagtgatgctccagtcagtgagctg
tctctggagctgttgctgctgcaggtggttctgccagctctcctggaacagggtcacaca
cgccagtggctcaaaggtctggtcagagcctggaccgtaaccgctggatacctactagac
ctccactcttacctgctgggagaacaggaagacgacgaggctaaccagcctgtcaacaac
aacaacaaccctgctcccggtcaccataacaacaacgctaaccccgcccctgctgtgggg
gaggggcttcatgcagcccatcaggccatactacagcagggaggacctataggcttccaa
ccctaccaccggcccctacgcttcccctttaggatcgtcctgctgatagggttcatgtgt
gtcaccctgctggtgtccagtctggtgtgtctgacgttaccagtgtttgcgggccgttgg
ctgatgtcgttctggacaggcagctctaagatccatgagctgtatacagcggcgtgtggt
ctgtacgtgtgctggctgtccatccgcggtgccaccgttctactggcctggatgccccag
ggacgcaccatcatcatgatcaaagtccaggagtggagcctcatgatcctgaagacactg
gtagtagcgttgctagtggctggtgttatccctctactgctgggcctgctgtttgaactg
gtcatcgtggctcccctacgcgttcctctggaccagacgcctctcctctacccctggcag
gactgggctctgggggtactccatgccaaaatcatcgctgccatcaccctcatgggtcca
cagtggtggctgaagactgtcatagaacaggtgtatgctaacggcatcaggaacatcgac
ctccatttcatcatctgtaagctggctgcccctgtcatctcagtgctgctgctgtccctc
tgtgtcccctatgtcatagcagccggggtcgtacctgccgtaggtctgtcaggtgtgtca
ggtgtgactccagagatgcagattctgatacagaggaggatctacccattcctcctgatg
gtggtgtccatcattggcatcctgtccttccagatacgacagttcaaacgcctttacgaa
cacatcaagaacgataagtacctggttggccagcggcttgtcaactacgaacgcaaggct
aggggaaccagctctgtcctgccccctaactcaatcccagagtag
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